| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3871 |
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| Symbol | |
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| ID | 5077482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009426 |
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| Strand | + |
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| Start bp | 38624 |
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| End bp | 41122 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640480980 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001165642 |
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| Protein GI | 146275481 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.234106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAACC GACTAATGTA TTTCAGGAAG GCCTTCCTGC GTGCCAGCGC CTCGGCTATG
GTCGGATACA TCGGGCTTGT GCCGATTTCG GCGCATGCAC AGGATGCCGC AGCAAGCGAG
CCCCAGGCCG AGGAGCAACA GACCGGCGGC CTCGAAGAGA TCACCGTGAC AGCGCGCAAG
CGGGCCGAGA ACCTGCAGGA AACACCAGTC GCGATCACCG CGATGACCGG CGGAATGCTC
GAGGAACGCC AGGTCACCAA CGTAGCAGAA GTCGCAAAAT TCGCGCCGAA CGTGAACATC
TCGCCGGTCG CCAACATTTC GGGTTCGAGC GCCTCGATCA CCGCGTTCAT CCGCGGCGTG
GGCCAGACCG ATTTCAATAT CACCGTCGAC CCGGGCGTGG GCGTCTATGT CGATGGCGTC
TATGTTGCCC GCTCGGTTGG CGCGCTGCTC GACATGGCCG ACGTTTCGAG CGTCCAGGTC
CTGCGCGGGC CGCAGGGCAC ACTGTTCGGC AAGAACACTA TCGGCGGCGC GATCGTCGTC
AATTCCGTCG AACCGCAGAA CGATTTCGAC ATGAAGCTCG AAGCGGCGAC CGGACGGTTC
AACCGCGCCG ATTTCAAGGG CATGATCAAC GTACCGCTGA GCGACACTCT CGCAATGCGC
GCGGTTGCTT CCTATGAAAC CCGCGACGGC TACCAGAAGC GTTTGTTCGA CGGAGGCCGC
CAGGGCAATA AGGACAGCTT CGGCGGACGC ATTGCGTTCA AGTGGGAGCC GACCGACAAG
CTGACCGTCA ACCTGAGCGG CGATATCAAT ATCAGGCGCG AAGAAATGGC TGCTTCGACG
CTGGTCAACC TTTTCGAATC GCCCAACCTG CTGCAGGTTG TCGACTTGAA TGGCCGAACC
GTGGTTTTCC CCAGTTCGAC TTATGCTTGG AACAAGTTGC AGGGCGGCGC AGGTTTCTGC
GGTGCGGACG GGCAACTGGC ACCGGTCAAC GACCCGCGCT GCGCCACCAC GCAGTGGATC
ACCGGCGATA TCGATTCAAC CTGGTCCGGT GCCAAGAACC AGTCGGATTT CGACCTGTGG
GGCACGAACC TGACGCTGGA TTATGATTTT GGTGACATCA ACCTGAAGTC GATCAGCTCC
TATCGCGATC AGAAGGCCAC GATCCAGTTC GACTTCGACG GAACGCCACA TCCCTACCTC
AACCTGACAA ACAATATCGA TCTGTGGCAG GCTTCGCAGG AATTCCAGTT GACCGGCAGT
GTCCTGAATG ATCGGGTGAA GTTCGTTCTG GGCGGCTATT ACCTGAAGGA AAAGGGCCAA
GACAAGAACA ACCTGCTGTT CGGCTTCGCT GACTTCTTCA GCGGCGGCAA GATCGACAAC
GACAGCTATG CTGCCTATCT GCAGGCAACG ATCAAGGTGA CCGATCGTCT TTCGATCACG
CCGGGCATCC GCTATACCGA CGAGACCAAG CGGTTCGATC CTTCGTTCCA GACCATCAAT
GTTGATTACA CTGCTCCGCT TGGGCAGGCC GGCATCATCC CTTACCCCCA GGGCGTGTTC
ATCGCCTTCA GCCAGTGCGT GACCGGCCAG CCAGTGCCCT TGCTGGTGAC CGATCCGGCG
AGCCCGCTGT TCGGCTTCCC GCTGCCTGGA GGCTGCGCAC CAGCCGCCAC TAACCCTGGT
GGAAACCACA CGATGCCGGC GGTCCAGGTT GCCGCCAAGG CCAAGGAATG GACGCCGGCA
ATTTCGGCTG ACTACAAGAT CACCGACGAT ATCCTGGTCT ATGCCTCCTA TTCCAAGGGT
TTCAAGAACG GCGGCTTCAC GCAGCGAATC TTCCCGGCTG AACAGGTTGC GCCGTCGTTC
AGGCCCGAAT TCGTGGAATC ATACGAACTC GGCCTCAAGA CCGAGCTGCT GGATCGCCGC
CTGCGGCTGA ACCTCGCCGC GTTCATGTCA AACTACGATG ACATCCAGGT CGTCGTCAGC
GAAGGCATCG CCCCCCGGGC ACGAAACGCC GGTTCCGGCC GGATCAAAGG CTTTGAAGTC
GAAGGCGAGG CGGCTCCGAC CGATTGGCTG CGCCTGACCT TCGGCGTTGG CTATCTTGAT
GCCTATTACC GCTCCATTGA TCCGCTCGCG TTCCCCGTGA ACCTGAACTC GAAGTTCGCC
TTCGTGCCGG AATGGACCGG ATCGGCCTCG TTCAACGCCG ACGTCTATGA AGGTGACATG
GGCAAGCTGA CGCTGCGCGG AGACTGGTCG TACCAGAGCG AAACCTTCAA GGATGCGGTC
AACAGCCCGC AACTGCGCCA GCCTGGCTAC AGCGTCTTCG GCGCCAGTGC TTCGTTCACC
GAGAAGAGCG AGCACTTCAC CGTGACCGCT GGTGTGACCA ACCTGACCGA CGAACGCTAT
ATCCAGGGCG GTTACGTAGA TCCGTTCGTC GCCGGGACAG CGTTGGCAAC CTATTCGCGC
CCGCGTGAAT GGTTCCTCAA GCTCGCCTAT AAGTACTGA
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| Protein sequence | MPNRLMYFRK AFLRASASAM VGYIGLVPIS AHAQDAAASE PQAEEQQTGG LEEITVTARK
RAENLQETPV AITAMTGGML EERQVTNVAE VAKFAPNVNI SPVANISGSS ASITAFIRGV
GQTDFNITVD PGVGVYVDGV YVARSVGALL DMADVSSVQV LRGPQGTLFG KNTIGGAIVV
NSVEPQNDFD MKLEAATGRF NRADFKGMIN VPLSDTLAMR AVASYETRDG YQKRLFDGGR
QGNKDSFGGR IAFKWEPTDK LTVNLSGDIN IRREEMAAST LVNLFESPNL LQVVDLNGRT
VVFPSSTYAW NKLQGGAGFC GADGQLAPVN DPRCATTQWI TGDIDSTWSG AKNQSDFDLW
GTNLTLDYDF GDINLKSISS YRDQKATIQF DFDGTPHPYL NLTNNIDLWQ ASQEFQLTGS
VLNDRVKFVL GGYYLKEKGQ DKNNLLFGFA DFFSGGKIDN DSYAAYLQAT IKVTDRLSIT
PGIRYTDETK RFDPSFQTIN VDYTAPLGQA GIIPYPQGVF IAFSQCVTGQ PVPLLVTDPA
SPLFGFPLPG GCAPAATNPG GNHTMPAVQV AAKAKEWTPA ISADYKITDD ILVYASYSKG
FKNGGFTQRI FPAEQVAPSF RPEFVESYEL GLKTELLDRR LRLNLAAFMS NYDDIQVVVS
EGIAPRARNA GSGRIKGFEV EGEAAPTDWL RLTFGVGYLD AYYRSIDPLA FPVNLNSKFA
FVPEWTGSAS FNADVYEGDM GKLTLRGDWS YQSETFKDAV NSPQLRQPGY SVFGASASFT
EKSEHFTVTA GVTNLTDERY IQGGYVDPFV AGTALATYSR PREWFLKLAY KY
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