Gene Saro_3858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3858 
Symbol 
ID5077469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp26108 
End bp26959 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content62% 
IMG OID640480967 
Productalpha/beta hydrolase fold 
Protein accessionYP_001165629 
Protein GI146275468 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.167759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGCT CGACTTTGGA CACGGCACGT CCGGAAATCG GTAGGTCGCT GGTTGTCGGC 
GGAAGCTCGA CCAATTACCA CGACGTCGGC GAAGGCGACC CGGTGCTGCT GGTCCACGGA
TCGGGCCCCG GTGTGACAGC CTGGGCCAAC TGGCGGCTGA ATATGCCGAT CCTCGCCGAG
GATTTCCGGG TCATCGCGCC CGACATGTTC GGCTTCGGCT ATTCGGACAG CAAGGGCCGG
ATCGAGGACA AGCAGGTCTG GGTCGATCAG CTCGCCGGCT TTCTCGACGG TCTGGGCATC
GACAAGGTTT CGATCGTCGG CAATTCTTTC GGCGGCGGGA TCACGCTGGC GTTCATGATC
GCCCACCCCG ATCGGGTGGA GCGCGCCGTT CTGATGGGAC CTGCAGGGCT CAACTTTCCG
ATTACCCCTG CGCTCGACAA GGTCTGGGGC TATGAACCCT CGGTCGAGGC GATGCGCGAA
TCGCTCAAGT ACCTTGCCTG GGATCACAGC CGCCTGACCG AGGATCTGAT TCAGTCGCGC
TATGTCGCCA GCGCCCGGCC CGAAGCACAT GAACCCTATC ATGCAACGTT CGGCGGCGCC
GACCGCCAGG CCAACGTGGC GATGCTCGCC AGCCGTGAGG AGGACATCGC CGCAATCGCG
CACGAAACCC TGATCCTGCA CGGGATTGCC GATCAGGTGA TCCCGCTCGA TTCTACCGTA
CGCCTCGCCA CGCTGATGAA GCGGGCCGAT CTGCATCTGT TCGCCGAATG CGGACACTGG
GTGCAGATCG AGCGGATGGC AAGTTTCAAC CGGATGGTTG CCGAGTTCTT TAGGAATGGT
CTCAAAGGCT GA
 
Protein sequence
MARSTLDTAR PEIGRSLVVG GSSTNYHDVG EGDPVLLVHG SGPGVTAWAN WRLNMPILAE 
DFRVIAPDMF GFGYSDSKGR IEDKQVWVDQ LAGFLDGLGI DKVSIVGNSF GGGITLAFMI
AHPDRVERAV LMGPAGLNFP ITPALDKVWG YEPSVEAMRE SLKYLAWDHS RLTEDLIQSR
YVASARPEAH EPYHATFGGA DRQANVAMLA SREEDIAAIA HETLILHGIA DQVIPLDSTV
RLATLMKRAD LHLFAECGHW VQIERMASFN RMVAEFFRNG LKG