Gene Saro_3843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3843 
Symbol 
ID5077454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp11228 
End bp11779 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content58% 
IMG OID640480953 
Product3-phenylpropionate dioxygenase subunit beta 
Protein accessionYP_001165615 
Protein GI146275454 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACA CCGCAACGAT CGAGCGCACG CGCGAAGGGA CTACCGCATC GCTCGAACTG 
ACCCACGCGC TGACCCAGAC GCTGTATCGC GAAGCACGGC TGCTCGACGA TGAACACTAC
AAGGCCTGGA CCAGCATGCT GGCGGAAGAC CTGCATTACC ACATGCCGGG GATCGAAACC
CGCTATCGCC GCGACAAGAC CGAGCAGGTG ACCGACCTGA CCCGGATGGC CTATTACAAC
GACAGCAAGC CCGAAATCCT CAAGCGGCTT TCGCGGCTCG AGACCGGAAC GGCCTGGTCG
GAGGATCCGG CGACGCGCTA CACCCATATC ATCACCAACG TCGAGGTGGA GCTTACCGAA
AACACCGACG AGTTCCGGGT CTATTCGAAC TTCTATGCCT ATCGCAATCG CAACGAACGC
GACGAGGATT CGCTGATCGG CAACCGTATC GATATCTGGC GCCAGGTCGG CAACAGCTTT
CAACTGGTCA AACGCCGAGC GATCCTCAAG CACAATGTGA TGTTGAGCAA GAACCTCAAC
ATCTACGTTT AG
 
Protein sequence
MTDTATIERT REGTTASLEL THALTQTLYR EARLLDDEHY KAWTSMLAED LHYHMPGIET 
RYRRDKTEQV TDLTRMAYYN DSKPEILKRL SRLETGTAWS EDPATRYTHI ITNVEVELTE
NTDEFRVYSN FYAYRNRNER DEDSLIGNRI DIWRQVGNSF QLVKRRAILK HNVMLSKNLN
IYV