Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3792 |
Symbol | |
ID | 5077940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009427 |
Strand | - |
Start bp | 437671 |
End bp | 439200 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640481515 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001166177 |
Protein GI | 146276017 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGCAA GTAATCCGGG TTCGGCCGGG GCGGATACGC CCCCGCTCGT ATCGCGCAAT CGCACGCTGA TGCTGATCGG CACGATGGCG GCGATGATCA TGTACACGCT GGACACGACG ATCGCCAACG TCGCGCTTCC GCACATGACC GCCTCTCTCG GGGCCACGCA GGATACGATC ACCTGGGTTC TGACAAGCTA CGTCCTTGCC TCGGCGGTCG CGCTGCCGCT GGCGGGCTGG CTGGTCGATC GGGTCGGCAT CCGCAACATG ATGCTCGCCT CTGTCCTCCT GTTCACCGCG GCCTCGATGC TGTGTGGCGC AGCGCAGAGC CTTGAGCAGA TGGTGCTGTT CCGCGTGCTT CAGGGTCTCG GCGGCGCGTT CCTGTCGCCG CTGGCACAGA CCGTCACCCT GGATTCAAGC ACGGCGGCGG AGCGGCCGCG GATGATGGGC ATATATACCC AGGGGGTCAT GCTCGGGCCG ATCACCGGCC CGATCATCGG CGGCTTCCTG ACGGACAACT ACAACTGGCG CTGGGTGTTC TACGTCAACG TGCCCGTCGG CGTGCTGTGC TTCCTGCTCC TTCTCCTGTA CCTTCCCAAG ACCCCGACGC GCGAGCGCAA GGTTGACCTG ACGGGCTGGC TGCTGGTGGC GCTGACGGTC TCGTCGATCC AGCTCATCCT CGACCGTGGC CTCACCCTTG ACTGGTTCGC GTCGGCAGAG ATCGTGACTT ACGCGGTCGT CGCCGGTGCC TGCGCGTGGC TCGGCTTGTT CCACCTTTCG GGAAGCCGTA ATCCGCTGTT TCCGACGGCG CTGTTCCACG ACCGCAACTT CACGGTCGGC CTTGCTTTCA TGTTCCTGAT CGGGCTGGTG ATGATGTCGG TCATGGCGCT CCTGCCGGGC CTGCTCCAGC AGATCTATGG CTACACCCCG CTGCAATCGG GCATGCTTCT AGCGCCGCGC GGTGTGGGGA TGCTGGCTTC GATCACGCTG TTCGGCAGGT TCATGGCAAA GGTCGACGCG CGCATCCTGC TCGCCTTCGG CCTCTCGCTC ATGGGCGCAT CGATGTGGAT GATGACGGGC TGGTCGACCG AGATGCCCCG CACCCCGATC ATCATGGCCG GCCTGCTTCA GGGCCTTGGC CTGAGCTTCA CGTTCATGCC GATGAACCTG ATCTCATTCG CGACCCTGCC GCCGCAGTAC CGCACCGACG CGTCGAGCCT TGGCAACCTG ATGCGCAACC TTGGTTCCTC GATCGGCATC GCCGCCGCCT CGGTCGAACT GGCGCGCAAT ATCCAGGTCA ACCATGCCGA GCTGGGCGCA CACGTCACCC GGTCTCTGGT GCCGTTCAAC CTCGACCGGA TCACCGCCTA TGGCGGCACC GCCGAGACCG CGCTGCGGGT GATGGACGGC CTCGTCAACC AGCAGGCAGC GATGATCGCC TACATCAACG ATTTCTACGC TATGGCGATG GCCTGCTTCG TCGCGATTCC CTTGCTCTTG CTGGTGCGGA CAGGCGCGAA GAAGGGCTAA
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Protein sequence | MSASNPGSAG ADTPPLVSRN RTLMLIGTMA AMIMYTLDTT IANVALPHMT ASLGATQDTI TWVLTSYVLA SAVALPLAGW LVDRVGIRNM MLASVLLFTA ASMLCGAAQS LEQMVLFRVL QGLGGAFLSP LAQTVTLDSS TAAERPRMMG IYTQGVMLGP ITGPIIGGFL TDNYNWRWVF YVNVPVGVLC FLLLLLYLPK TPTRERKVDL TGWLLVALTV SSIQLILDRG LTLDWFASAE IVTYAVVAGA CAWLGLFHLS GSRNPLFPTA LFHDRNFTVG LAFMFLIGLV MMSVMALLPG LLQQIYGYTP LQSGMLLAPR GVGMLASITL FGRFMAKVDA RILLAFGLSL MGASMWMMTG WSTEMPRTPI IMAGLLQGLG LSFTFMPMNL ISFATLPPQY RTDASSLGNL MRNLGSSIGI AAASVELARN IQVNHAELGA HVTRSLVPFN LDRITAYGGT AETALRVMDG LVNQQAAMIA YINDFYAMAM ACFVAIPLLL LVRTGAKKG
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