Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3738 |
Symbol | |
ID | 5077886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009427 |
Strand | - |
Start bp | 375037 |
End bp | 375798 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640481461 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001166123 |
Protein GI | 146275963 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCACC GTTTCGCCGG AAAGCGCGTT CTCCTCACCG GTGGCGCATC GGGCATTGGC CGCGCCACCG CAGAACGCTT TGCCGCCGAA GGCGCGAGAA TCGTGATCGG CGACGTGGAC CTCGAAGGCG CGAGTACCGT TGCTCAGTCG CTCGGCGGCA AAGCGTTTTC CTATGACGCG CGCGATCCTG CGGCAGCTGG TGGTCTGGTG ACGGAGGCCG TTGAGGTACT AGGCGGGATC GACATCCTGC TCAACGTCGC GGGCATAATG ACCTGGGGCC GGTTCGAGGA AACCTCGCCG CAGGCATGGC AACGCACGAT GGACATCAAC CTCTCCGGAC CGTTCTTTCT GATCCAGGCC TCGATCCCGC ACCTCAAGGC ATCCAAGGGC AACGTGGTCA GCGTCGCGTC GGCCGGCGGT CTCCATCCTG TATATGGCAC TTCGGCCTAT GGCGTGAGCA AGGCAGGCGT GATCGCGATC ACGCAATCGG CGGCGCTGGA ATTTGCGCGC TTCGGCGTCC GCGCAAACGC GGTGGCGCCA GGCGGCGTGG CAACGCCGAT GCACGAAAAA TCCTCTGCGG GAGGCGGCGT CGATCCGGCC ATCTTCGCGG AAGCCGCCGG ACGCAACATG CCCAAGCTTA CCGACCGCCC CGCCTGCACG CCCGAGGAAG TCGCGGCGGC AATCGCCTAC CTCGCCAGCG ACGAGGCGCG CTACGCCACG GGCACCGTGC TCGTGCTCGA TGGCGGGCAG ATCACCGGCT GA
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Protein sequence | MIHRFAGKRV LLTGGASGIG RATAERFAAE GARIVIGDVD LEGASTVAQS LGGKAFSYDA RDPAAAGGLV TEAVEVLGGI DILLNVAGIM TWGRFEETSP QAWQRTMDIN LSGPFFLIQA SIPHLKASKG NVVSVASAGG LHPVYGTSAY GVSKAGVIAI TQSAALEFAR FGVRANAVAP GGVATPMHEK SSAGGGVDPA IFAEAAGRNM PKLTDRPACT PEEVAAAIAY LASDEARYAT GTVLVLDGGQ ITG
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