| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3602 |
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| Symbol | |
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| ID | 5077751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 225853 |
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| End bp | 227358 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640481326 |
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| Product | amidase |
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| Protein accession | YP_001165988 |
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| Protein GI | 146275828 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00171301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCCA CCAGAAGGGA AGCCCTCGCC GGCGGGATCG CGCTTGCCGC GACCGCCGGC
CTGCCGGGGA GCGCGCAAGC GATGCAGGAT GTTCTCGACA CCCATGACTC GCTCGGCCTT
GCCGAGCTGG TGAGGAAGCG CAAGGTTTCG GCCGCAGAGT TGCTCGAGGC CGCCATCGCG
CGCGCCGAGG CAATGAACCC GCGCTTCAAT TTCATGGCGC AGAAGCACTA CGACTACGGG
CGCAAGGCCA TTGCCCAGGG CCTGCCGGAA GGACCGTTCA CCGGGGTTCC CTGGCTGCTC
AAGGACCTCA ACACCTATAT CGCGGGCGAG GTGACCGAGA ACGGCAGCCG TCTCTACAAG
GGCCAGCGTG CGAGCGTGAC CTCTGAACTG GTGCGGCGGA TCGAGCGTGC GGGCTTTGCC
ATCTTCGGCA AGACGACGAC GCCCGAATTC GGCCTGACCG GCACGACCGA GAGCGTGCTG
ATGGGCCCGA CGCGCAATCC GTGGAATCCG GGGCGCATCG CTGGCGGATC GTCGGGCGGC
GCGGCGGCGG CTGTGGCGGC GGGCGTGATC CCGGCGGCAC ACGCGACCGA TGGCGGCGGA
TCGATCCGCA TTCCGGCGTC GGCCTGCGGG CTGTTCGGCC TCAAGCCCTC GCGCGGGCGC
GTGCCGATGG GCCCATCGCG CACCGAAGGC TGGGGCGGCA TGTCGGTCCA CCACGCGGTG
ACGCGCACGG TGCGCGATTC CGCCGCGATC CTCGATGCGA CGCATGGGGT GGAGCCGGGC
TCGCGCTATG GCGCTCCGAC GCCAGAACGG CCGTTCCTTG CAGAGGTCGG CCGCGATCCG
GGCAAGCTGC GGGTGGCGCT TATGCTTTCG CCGTTCTCGG GCGCGCCGGT CGATCCGGAA
GTGATCGCGG CGACGCAGGG GGCGGCAAGG CTGCTCGAAA CCCTCGGGCA TCATGTCGAG
GAAGCCGCGC CGAAGATCGA TTTCGCCAGC ATCGGCGCCA GCAGCTTCGC GCTCATGGCA
TCGTCGGTGG CGGCCGATTG CGTCGACCGG GCCAAGGCGC TGGGCATCGA GTTGGGGCCG
GACGTGCTGG AGCGGACGAC GCTCGATTTC GTCGCGATGG GCAAGGCCTA TACCGGCATG
GACTTCGCGC GGGGCAACAG CGCCTATCAG GCTGCCGCCG TTTCGATCGC GCAGTTCATG
GAAGGCTATG ACGTGATCCT TTCGCCCACG CTGTCGGCGC CGCCGCTGCC GCTGGGCCGG
GTGGGCCTGG ATACCGGGCG CTCGATGGCT GACTGGGGCC GCGAGGTCGG CGCGTTCACC
GCCTTTACCG GCATCTACAA CGGCACCGGC CAGCCGAGCA TGTCGCTTCC GCTGGGCATG
TCGAAGGATG GCCTGCCCAT CGGGATCATG GCCACGGGTC GTTATGGCGA GGAGGCACTG
CTCCTGCGTC TTGCCGGACA GGTCGAGAAG GCAGCACCGT GGGCGGCGCG GCGGCCCACG
GTTTGA
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| Protein sequence | MKATRREALA GGIALAATAG LPGSAQAMQD VLDTHDSLGL AELVRKRKVS AAELLEAAIA
RAEAMNPRFN FMAQKHYDYG RKAIAQGLPE GPFTGVPWLL KDLNTYIAGE VTENGSRLYK
GQRASVTSEL VRRIERAGFA IFGKTTTPEF GLTGTTESVL MGPTRNPWNP GRIAGGSSGG
AAAAVAAGVI PAAHATDGGG SIRIPASACG LFGLKPSRGR VPMGPSRTEG WGGMSVHHAV
TRTVRDSAAI LDATHGVEPG SRYGAPTPER PFLAEVGRDP GKLRVALMLS PFSGAPVDPE
VIAATQGAAR LLETLGHHVE EAAPKIDFAS IGASSFALMA SSVAADCVDR AKALGIELGP
DVLERTTLDF VAMGKAYTGM DFARGNSAYQ AAAVSIAQFM EGYDVILSPT LSAPPLPLGR
VGLDTGRSMA DWGREVGAFT AFTGIYNGTG QPSMSLPLGM SKDGLPIGIM ATGRYGEEAL
LLRLAGQVEK AAPWAARRPT V
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