Gene Saro_3551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3551 
Symbol 
ID5077700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp167825 
End bp168907 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content65% 
IMG OID640481275 
Productalpha/beta hydrolase fold 
Protein accessionYP_001165937 
Protein GI146275777 
COG category[I] Lipid transport and metabolism 
COG ID[COG3243] Poly(3-hydroxyalkanoate) synthetase 
TIGRFAM ID[TIGR01836] poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAGT CCGATCCGCT TTCCCCCGAA GCCGTGGCCG AGCGCGTCCG CCGCGAGGTG 
GACCGCGCGC TCAAGCGCAA CATCAAGGGC CTGGAATTCC TCGCCGCGCC CCGCCAGGAA
GTGGGCGCGA TGGAGAAGGA GCTGGTCCAC CGCGAGGGGA CCGCACTGCT CTATCGCTAT
CGCCCGGTGG TGGACGAGAT CTACCGCCTG CCGCTGCTGA TCGTCTCGCC GCCGAGCAAC
AAGGGCTATA TATTCGACCT CGCACCCGGG CAGAGCATGG TCGAGTACCT GCTGAACCGG
GGCTATGACG TGTTCAACCT CGACTGGGCG CCGCCTCGCC GCGACGAGGC GCACCTCGGC
CTGGCCGACT ACGTCGACCG CTTCATCCCG GACAGCCTCG CGAAGATCGC CGAGATCACC
GGCGAAGAGG AAGCGAGCCT TGCCGGCTAT TGCATGGGCG GCACGCTGGC GACGATCCAC
GCCGCGCTTC ATGCCGGGAA TGGGGTCAGG AACCTTGTCC TGTTCGCGAC GCCTGTCGAT
TTCACCCACA TGCACCTGTT CCAGAAGTGG TCCGACAAGC GTCACTTCGA CGTGGACGAG
GTTGTCGACA AGCTGGGCGT GATCCCTCCC GAGATCATGC TGGGCGCATT CGACCTGGCC
CGCCCGGCCA ACCGCACGGC GGGCCGGATG CACCTGTGGA CCAACATGTG GAACGACGAG
TTCGTCCGTT CCTATCGCAT GTTCGACCGC TGGGCCGCCG AGACGCTGCC GGTGCCGGGC
GAATATTTCC GCGAGCAGAT CAAGCACCTG ATGTGGGACA ACGCGCTGGC ATCGGGCACG
CTGGAGGTAG GCGGGCGCAA GGCCGATCTC GCGAACATAG CTGTTCCCAT CCTCAACGTG
GTGGCGCAGC ACGACCATAT CGTCAGCCAC GAGGCTACGC AGCCGCTCAA GCTGCTGACA
TCGAGCGACG ATTACGAGGA AATCGTTTCC AAGGGCGGCC ACGTGAGCCT TGTTGCCGGC
CCTTCGGCGC TGAAAAGACT CTGGCCGCTG ATCGACGGCT GGCTTGGCAA GAGGTCCGTG
TGA
 
Protein sequence
MAESDPLSPE AVAERVRREV DRALKRNIKG LEFLAAPRQE VGAMEKELVH REGTALLYRY 
RPVVDEIYRL PLLIVSPPSN KGYIFDLAPG QSMVEYLLNR GYDVFNLDWA PPRRDEAHLG
LADYVDRFIP DSLAKIAEIT GEEEASLAGY CMGGTLATIH AALHAGNGVR NLVLFATPVD
FTHMHLFQKW SDKRHFDVDE VVDKLGVIPP EIMLGAFDLA RPANRTAGRM HLWTNMWNDE
FVRSYRMFDR WAAETLPVPG EYFREQIKHL MWDNALASGT LEVGGRKADL ANIAVPILNV
VAQHDHIVSH EATQPLKLLT SSDDYEEIVS KGGHVSLVAG PSALKRLWPL IDGWLGKRSV