| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3543 |
|---|
| Symbol | |
|---|
| ID | 5077692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | - |
|---|
| Start bp | 160464 |
|---|
| End bp | 161243 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640481267 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001165929 |
|---|
| Protein GI | 146275769 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATTG CTCTCAACAA TGTGGTCGCC GTCGTCACCG GCGCGGCGGG AGGCATCGGC
CGCGAACTGG TCAAGGCGAT GAAGGCCGCC AACGCCATCG TCATCGCCAC CGACATGGCC
CCCTCGGCCG ATGTCGAAGG CGCGGACCAT TATCTCCAGC ACGACGTGAC GAGCGAGGCC
GGCTGGAAGG CCGTCGCGGC GCTGGCCCAG GAAAAGTACG GGCGCGTCGA TGCGCTGGTG
CACAACGCGG GCATCTCGAT CGTCACGAAG TTCGAAGACA CTCCGCTGTC CGATTTCCAC
CGCGTGAACA CGGTCAACGT CGATTCCATC ATCATCGGTA CGCAGGTCCT GCTGCCGCTG
CTCAAGGAAG GCGGCAAGGC GCGCGCAGGG GGCGCCTCGG TGGTCAACTT CTCCAGCGTC
GGGGGCCTGC GCGGCGCGGC GTTCAATGCG GCCTATTGCA CCAGCAAGGC GGCGGTGAAG
ATGCTCTCGA AGTGCCTCGG CGCGGAATTC GCGGCGCTCG GCTACAACAT CCGCGTCAAC
TCCGTGCATC CGGGCGGCAT CGATACCCCG ATGCTCGGCT CGATCATGGA CAAGTACGTC
GAACTCGGCG CTGCCCCCTC GCGCGAGGTG GCCCAGGCCG CGATGGAAAT GCGCCACCCG
ATCGGTCGCA TGGGTCGCCC TGCCGAAATG GGCGGCGGCG TGGTCTATCT CTGCTCCGAC
GCAGCAAGCT TCGTCACCTG CACGGAATTC GTGATGGACG GCGGCTTCAG CCAGGTCTGA
|
|---|
| Protein sequence | MTIALNNVVA VVTGAAGGIG RELVKAMKAA NAIVIATDMA PSADVEGADH YLQHDVTSEA
GWKAVAALAQ EKYGRVDALV HNAGISIVTK FEDTPLSDFH RVNTVNVDSI IIGTQVLLPL
LKEGGKARAG GASVVNFSSV GGLRGAAFNA AYCTSKAAVK MLSKCLGAEF AALGYNIRVN
SVHPGGIDTP MLGSIMDKYV ELGAAPSREV AQAAMEMRHP IGRMGRPAEM GGGVVYLCSD
AASFVTCTEF VMDGGFSQV
|
|---|
| |