| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3528 |
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| Symbol | |
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| ID | 5077677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 144141 |
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| End bp | 144827 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640481252 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001165914 |
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| Protein GI | 146275754 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.97281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACCG TTGCAATCAC CGGCGCAGGG CGCGGCATCG GCCTGGAGTT GGCCCGCCAG
CATGTCGAAG CGGGCGACCG GGTGCTGGCG CTCGTGCGAG ATCCCGCCGG CGCGAAGACC
CTGGCGGACC TCGCCGCGGC ATCGGCCGGC AAGCTTACCG TGCACCGCAT GGACGTGGGC
GACGATGCGT CCGTCCGTGC GGGCGCGGCG GACACCGGCA GCGAGCCGGT AGACGTCCTC
TACAACGTCG CCGGGGTCAG CGGGCCCGAA GGCGCGGAAC TTGAAAGCGC CGACTGGGAT
GCCTGGGACG AGACGTTCCG GATCATGGTG CAGGGGCCGC TGCGCGTGCT GCAGGCATTC
CTGCCGCGAC TGGGCGCCGG CGCGAAGGTC ATCAACATCT CGAGCCAGCT TGCCGCTTCG
ACCTGGCCCT ATGGCGGTTA CTATGCCTAT TCGGGCGCGA AGGCGGCACT GAACCGCATG
ATGCGTTCGG TCGCCATCGA CCTCAAGGAC CGTGGCGTGA TCGTCGGGCT GGTCCATCCC
GGCTGGGTGC AGACCGACAT GGGCGGCGAA GGCGCCGACA TCACTCCCGC CGAAAGCGCC
GCCGGCATCC GCAAGGTCGC TTCCGACTGG ACGCTCGAGC GTTCCGGAGA CTTCCTCAAG
TGGAACGGCG AAGAGCACGC CTGGTAA
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| Protein sequence | MATVAITGAG RGIGLELARQ HVEAGDRVLA LVRDPAGAKT LADLAAASAG KLTVHRMDVG
DDASVRAGAA DTGSEPVDVL YNVAGVSGPE GAELESADWD AWDETFRIMV QGPLRVLQAF
LPRLGAGAKV INISSQLAAS TWPYGGYYAY SGAKAALNRM MRSVAIDLKD RGVIVGLVHP
GWVQTDMGGE GADITPAESA AGIRKVASDW TLERSGDFLK WNGEEHAW
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