| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3411 |
|---|
| Symbol | |
|---|
| ID | 5077560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | - |
|---|
| Start bp | 11819 |
|---|
| End bp | 12940 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640481135 |
|---|
| Product | poly-gamma-glutamate biosynthesis protein |
|---|
| Protein accession | YP_001165797 |
|---|
| Protein GI | 146275637 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2843] Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.784569 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTCCATA CCGTTCTGGC AACCGGCGAC CTTGCCATGG ACCGCGACGA TTACGACGCC
TGCTTTGCGG GTACGCGCGC GGTACTGAAC GAAGCCGACA TCGTTTTCGG GCAGCTCGAA
ACGAGCTTTG CCGAAAAGGG CGTTCGCCTG CCGCAGGCTC GTCACGCCGT GCTCGCCCGC
CCCGATGGTG CGGGGGCGCT TGCCCGCGCG GGCTTCGACG TGATCTCGAT GGCAGGCAAC
CACGTCATGG ACTGGGGCCA CGAGGCTTTC TTCGAAACGC GCGGCCATAT CGAGGCGCAG
GGAATGAGCG TCGTCGGTGC GGGTGCCAAC ATTGCCGAGG CGCGCCGTCC GGTCATCCGC
ACCCTGCCCG ATGGCACCCG CGTTGCCTTC CTCGCCTACT CGAGCATCCT GCCCCATTCC
TACTGGGCGG ATGAGCGCAG GCCTGGCTGC GCGCCGATGC GTGCCTTCAC CGTCTACGAG
CAGATTGAGC ACGACCAGCC CGGCACTCCC GCGCGTATCC ACACTTATCC CCACCGCGAG
GATCTCGCCG CGATGGAGGC CGACATCCGC GCGGCGAAGG AACAGGCCGA CGTGGTGCTG
GTTTCCCATC ACTGGGGCAT CCATTTCGTG CGCGCGGTCA TCGCCGATTA CCAGCGCGAC
GTCGCCCGTG CCGCGATTGC CGCGGGCGCC GATGCGATCT TCGGAGGCCA TGCCCATATC
CTCAAGGGAT GCGAGATGAT CGAGGGCAAG CCGGTGTTCT ATTCCCTGTG CAATTTCGCC
ACCGACCTGC GCATGGACCC GGCCCATGCC GCCTCGAAGA GCTTCAACGA AATCCGTGTT
CTTGCAGAGG AATGGGACCC GGACTTCGAA AGTCTCTACA ACTTTCCAAA GGCCGCGCGC
CTGTCGATCA TTGCCCGCCT GGATATTGCC GGGGGCAAGG TCCTGCGCGC GGGATTCCTG
CCGGTGACGA TCGGTCGCGA CGCCGTGCCC CGGCTTGCCG AACCGGGCAG CGAGGACCAT
GGGGCGGTCG TCGACTACCT TTCCGCAGTG ACCGAAGAAG CCGGGCTAAA CGCCCGCTAT
AGAATGGAAA ATGATATGGT TCTGGTGGAG TTGGCCGAGT GA
|
|---|
| Protein sequence | MVHTVLATGD LAMDRDDYDA CFAGTRAVLN EADIVFGQLE TSFAEKGVRL PQARHAVLAR
PDGAGALARA GFDVISMAGN HVMDWGHEAF FETRGHIEAQ GMSVVGAGAN IAEARRPVIR
TLPDGTRVAF LAYSSILPHS YWADERRPGC APMRAFTVYE QIEHDQPGTP ARIHTYPHRE
DLAAMEADIR AAKEQADVVL VSHHWGIHFV RAVIADYQRD VARAAIAAGA DAIFGGHAHI
LKGCEMIEGK PVFYSLCNFA TDLRMDPAHA ASKSFNEIRV LAEEWDPDFE SLYNFPKAAR
LSIIARLDIA GGKVLRAGFL PVTIGRDAVP RLAEPGSEDH GAVVDYLSAV TEEAGLNARY
RMENDMVLVE LAE
|
|---|
| |