Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3307 |
Symbol | |
ID | 3915954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 3525997 |
End bp | 3527214 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640446092 |
Product | major facilitator transporter |
Protein accession | YP_498576 |
Protein GI | 87201319 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0906362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCACC GCGCCTCGTT CGGTATCGTC TTCGCGATCG TGATGATCGA CATGCTGGGC TTCGGGATCG TCACCCCGGT GCTGCCCGGC CTGATCATCG AGCTGACCCG CGTCGACATC GGCACAGCGG CGGAATACGC GGGCTGGCTG GGCGCCGGAT ATGCGACGAT GCAGTTCGTG TTCGCGCCGG TCATCGGCAA CCTGTCCGAC CGGTTCGGGC GCAGGCCGGT GCTTCTTGCC GCGATCCTGA TGCTCGGGCT GGACTACCTG CTTCAGGCCA TGGCCCCGCA TTTCTGGTGG CTGATCATCG GCCGGCTGCT GGCGGGCGTC ACCGGCGCGA GCTTTTCGGC CGCCTACGCC TATATCGCCG ACGTGACCCC GCCCGAAAAG CGCGCGGCAA ACTTCGGAAT GATGGGCCTT GCCTTCGGGT TCGGCTTCGT GGTCGGTCCC GCGATGGGGG GACTTCTTGG CGCGATAAGC CCGCGCCTGC CGTTCTATGC GGCATCCGCC CTCGCATTGA CGAACTTCGT GTTCGGCATG TTCTTCCTGC GCGAATCGCT CGCACCGGAA AACCGCCGCC CATTCGACTG GCGGCGGGCA AACGCACTGT CGTCGCTGCG CGCGCTGCGG GGACGGAGCC GGACCGTGCT GTGGTTCGTT GCTGCGCTGG GCGCGTGGCA GCTCGCCCAC GTGGTCTACC CGGCGGTCTG GCCCTATTTC GCCATCGCCG CCTACGGTTT TTCGACCCGC GACGTCGGAC TGGCACTGGC GATGGTAGGG TTTTCGAGCG CGCTGGTTCA GGGCTTCGGC CTGCGCTTTG CCCTGCCGCG GCTGGGCGAG CGCCGCGCCG TGGTGCTGGG GGTGGCCGGA CTGTGCGCAT CGGCCGTGCT CTACAACCTC GCCCAGCACA CCTGGCAGGT CTATCTGGCG ATTGCCGTGG GCGCCTTGCA GGGCTTCGTC CAGCCGCCGA TCGCCGCGTT CAACAGCCGC GCGGTCGATG CGCGCAGCCA GGGCGAATTG CAGGGCGCGG TGCAATCGAT CGGCTCGATC GCGGCCATCG TCGGTCCGCC GCTCTATACC CAGACGCTAG CGCGGTTCAG CGGGCCGCAC GCCATCGTCA ACCTGCCGGG GATGCCGATG CTGCTTTCGG CGGCGATCTC GCTGATGACG CTGGCCCTGT TCTGGAAGGG CGCCTCGCTG CTGCGCGAGA GCGAATGA
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Protein sequence | MQHRASFGIV FAIVMIDMLG FGIVTPVLPG LIIELTRVDI GTAAEYAGWL GAGYATMQFV FAPVIGNLSD RFGRRPVLLA AILMLGLDYL LQAMAPHFWW LIIGRLLAGV TGASFSAAYA YIADVTPPEK RAANFGMMGL AFGFGFVVGP AMGGLLGAIS PRLPFYAASA LALTNFVFGM FFLRESLAPE NRRPFDWRRA NALSSLRALR GRSRTVLWFV AALGAWQLAH VVYPAVWPYF AIAAYGFSTR DVGLALAMVG FSSALVQGFG LRFALPRLGE RRAVVLGVAG LCASAVLYNL AQHTWQVYLA IAVGALQGFV QPPIAAFNSR AVDARSQGEL QGAVQSIGSI AAIVGPPLYT QTLARFSGPH AIVNLPGMPM LLSAAISLMT LALFWKGASL LRESE
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