Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3295 |
Symbol | |
ID | 3915942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 3515840 |
End bp | 3517096 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640446080 |
Product | Na+ dependent nucleoside transporter-like |
Protein accession | YP_498564 |
Protein GI | 87201307 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0945024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGTCG TGTCCAGCCT CGTCGGGATG GTGCTCATCC TTGCGCTCGC CTTTCTTCTC TCCTCGAACC GCCGTGCGAT TCGCCCGCGG GTCGTGGCCG CCGCTTTCGC GCTTCAGGCC GGGTTTGCCG CACTGGTGCT TTACGTACCG TTCGGCAACC GCGCGCTGCA GGGTGCGGCG GGCGGCGTCG AAAGCCTGCT CGGGTTCGCG CGGGCCGGGG TGGCGTTCCT GTTCGGCCCG CTGGCCGACC CGGCCATCGG CGGCACCAGC TTCGCCATTT CCGCTCTGCC GGTGATCGTG TTCTTCGCGG CGCTGATCTC GATCCTCTAC TATCTCGGCG TGATGCAATT GGTGATCCGG TGGATCGGCG GCGCGCTGGA GAAGGTCACC GGCATCAGCA AGGTCGAATC GCTGTGCGCG GCGAGCAACA TCTTCGTCGG GCAGAGCGAA TCCCCGCTGG TGATCCGGCC CTATCTTGCC GGGCTCAACC CCTCGCAGCT TTTCTGCGTG ATGACCGTGG GCATGGCCGG CGTGGCGGGG ACCATCCTGG CGGCTTACGC CTCGATGGGC ATCCGCATCG ACTACCTGGT CGCCGCAGCG TTCATGTCGG CACCGGGCGG TATCCTGATG GCCAAGCTGA TGATGCCGGA CGAGCCGCCT GTCCCGGCCG AGGTGGGGGG CGAGGATCTG CCCAACCCGC ACGTGAAGCC GAGCCTCGCT TCGGACGAGG AAGAGCGTCC CGCCAATATC ATCATGGCAG CCAGCCAGGG GGCGCAGACC GGCGTCAAGC TTGCCGTCGC GGTGGGTGCG ATGGTGCTGG CCTTCGTTGC GCTGGTAGCG CTGGCGAACG GCGTGCTGGG ATGGATCGGC GGCTGGTTCG GCGCGCCGCA GCTCTCATTC CAGATGGTGC TTGGCTATGT CTTTGCGCCG GTGTTCTACC TGCTCGGCGC GGATGGCTGG GCCGAGGCGA TGCAGGCGGG GGGATTGTTC GGCAGCAAGA TCGTGCTGAA CGAGTTCGTC GCCTTCATCG AACTGGGCAA GGACACCGCG CTGTCGCAGC ATACCGTCGC CATCGTCACG TTCGCGCTGT GCGGCTTTGC CAATTTCAGC TCTATCGCGA TTCAGATGGC GGTGACCGGC GGCCTGGCGC CGAACCAGCG CCCGGTGATC GCCAAGCTCG GTATCCGCGC CCTGGTGGCC GGGGCGCTGA GCAATCTGAT GAGCGCGGCG CTGGCGGGAC TTTTCCTGAG CCTTTGA
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Protein sequence | MRVVSSLVGM VLILALAFLL SSNRRAIRPR VVAAAFALQA GFAALVLYVP FGNRALQGAA GGVESLLGFA RAGVAFLFGP LADPAIGGTS FAISALPVIV FFAALISILY YLGVMQLVIR WIGGALEKVT GISKVESLCA ASNIFVGQSE SPLVIRPYLA GLNPSQLFCV MTVGMAGVAG TILAAYASMG IRIDYLVAAA FMSAPGGILM AKLMMPDEPP VPAEVGGEDL PNPHVKPSLA SDEEERPANI IMAASQGAQT GVKLAVAVGA MVLAFVALVA LANGVLGWIG GWFGAPQLSF QMVLGYVFAP VFYLLGADGW AEAMQAGGLF GSKIVLNEFV AFIELGKDTA LSQHTVAIVT FALCGFANFS SIAIQMAVTG GLAPNQRPVI AKLGIRALVA GALSNLMSAA LAGLFLSL
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