Gene Saro_3295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3295 
Symbol 
ID3915942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3515840 
End bp3517096 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content66% 
IMG OID640446080 
ProductNa+ dependent nucleoside transporter-like 
Protein accessionYP_498564 
Protein GI87201307 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0945024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGTCG TGTCCAGCCT CGTCGGGATG GTGCTCATCC TTGCGCTCGC CTTTCTTCTC 
TCCTCGAACC GCCGTGCGAT TCGCCCGCGG GTCGTGGCCG CCGCTTTCGC GCTTCAGGCC
GGGTTTGCCG CACTGGTGCT TTACGTACCG TTCGGCAACC GCGCGCTGCA GGGTGCGGCG
GGCGGCGTCG AAAGCCTGCT CGGGTTCGCG CGGGCCGGGG TGGCGTTCCT GTTCGGCCCG
CTGGCCGACC CGGCCATCGG CGGCACCAGC TTCGCCATTT CCGCTCTGCC GGTGATCGTG
TTCTTCGCGG CGCTGATCTC GATCCTCTAC TATCTCGGCG TGATGCAATT GGTGATCCGG
TGGATCGGCG GCGCGCTGGA GAAGGTCACC GGCATCAGCA AGGTCGAATC GCTGTGCGCG
GCGAGCAACA TCTTCGTCGG GCAGAGCGAA TCCCCGCTGG TGATCCGGCC CTATCTTGCC
GGGCTCAACC CCTCGCAGCT TTTCTGCGTG ATGACCGTGG GCATGGCCGG CGTGGCGGGG
ACCATCCTGG CGGCTTACGC CTCGATGGGC ATCCGCATCG ACTACCTGGT CGCCGCAGCG
TTCATGTCGG CACCGGGCGG TATCCTGATG GCCAAGCTGA TGATGCCGGA CGAGCCGCCT
GTCCCGGCCG AGGTGGGGGG CGAGGATCTG CCCAACCCGC ACGTGAAGCC GAGCCTCGCT
TCGGACGAGG AAGAGCGTCC CGCCAATATC ATCATGGCAG CCAGCCAGGG GGCGCAGACC
GGCGTCAAGC TTGCCGTCGC GGTGGGTGCG ATGGTGCTGG CCTTCGTTGC GCTGGTAGCG
CTGGCGAACG GCGTGCTGGG ATGGATCGGC GGCTGGTTCG GCGCGCCGCA GCTCTCATTC
CAGATGGTGC TTGGCTATGT CTTTGCGCCG GTGTTCTACC TGCTCGGCGC GGATGGCTGG
GCCGAGGCGA TGCAGGCGGG GGGATTGTTC GGCAGCAAGA TCGTGCTGAA CGAGTTCGTC
GCCTTCATCG AACTGGGCAA GGACACCGCG CTGTCGCAGC ATACCGTCGC CATCGTCACG
TTCGCGCTGT GCGGCTTTGC CAATTTCAGC TCTATCGCGA TTCAGATGGC GGTGACCGGC
GGCCTGGCGC CGAACCAGCG CCCGGTGATC GCCAAGCTCG GTATCCGCGC CCTGGTGGCC
GGGGCGCTGA GCAATCTGAT GAGCGCGGCG CTGGCGGGAC TTTTCCTGAG CCTTTGA
 
Protein sequence
MRVVSSLVGM VLILALAFLL SSNRRAIRPR VVAAAFALQA GFAALVLYVP FGNRALQGAA 
GGVESLLGFA RAGVAFLFGP LADPAIGGTS FAISALPVIV FFAALISILY YLGVMQLVIR
WIGGALEKVT GISKVESLCA ASNIFVGQSE SPLVIRPYLA GLNPSQLFCV MTVGMAGVAG
TILAAYASMG IRIDYLVAAA FMSAPGGILM AKLMMPDEPP VPAEVGGEDL PNPHVKPSLA
SDEEERPANI IMAASQGAQT GVKLAVAVGA MVLAFVALVA LANGVLGWIG GWFGAPQLSF
QMVLGYVFAP VFYLLGADGW AEAMQAGGLF GSKIVLNEFV AFIELGKDTA LSQHTVAIVT
FALCGFANFS SIAIQMAVTG GLAPNQRPVI AKLGIRALVA GALSNLMSAA LAGLFLSL