| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3206 |
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| Symbol | |
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| ID | 3917464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 3421708 |
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| End bp | 3424344 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640445990 |
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| Product | methionine synthase (B12-dependent) |
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| Protein accession | YP_498475 |
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| Protein GI | 87201218 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.336651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATA CCCCCACCGG CTCGCGTTTC GTCAACGTCG GCGAACGCAC CAACGTCACC
GGCTCCGCCG CGTTCAAGAA GCTGATCCTC GCGGGCGACT ACGCCAAGGC GGTCGAAGTC
GCGCGCCAGC AGGTCGAGAA CGGCGCGCAG GTCATCGACG TCAACATGGA CGAGGGCCTG
CTCGACGCGG TCGAGGCCAT GACCACGTTC CTCAAGCTGA TCGCCGCCGA GCCCGATATT
GCCCGCGTGC CGGTGATGAT CGACAGCTCG AAGTGGGAAG TGATCGAAGC GGGCCTAAAG
TGCGTTTCGG GCAAGCCCAT CGTCAACTCG ATCTCGATGA AGGAGGGCGA GGACGCCTTC
CTCCACCACG CCCGCCTGTG CATGGACTAT GGCGCTGCCG TTGTCGTCAT GGCGTTCGAC
GAGAAGGGCC AGGCCGATAC GAAGGAGCGC AAGGTCGAGA TCTGCGAGCG GGCCTACAAG
TTGCTCACCG GTATCGGCTT CCCGGCCGAA GACATCATCT TCGATCCCAA CATCTTCGCC
GTCGCCACCG GCATCGAGGA GCATGACCGC TACGGGCTGG ACTTCATCGA AGCCACGGCC
GAGATCAAGG CGCGCTGTCC CCACGTCCAT ATCTCGGGCG GCCTGTCGAA CCTCTCGTTC
TCGTTCCGCG GCAACGAGAC AGTGCGCCGC GCGATGCATT CGGTGTTCCT CTACCACGCC
ATCCCTGCGG GCATGGACAT GGCCATTGTC AACGCCGGCC AGCTCGACAT CTACGACCAG
ATCGACCCGG TCCTCCGCGA GGCTTGCGAG GACGTCGTGC TTAACCGCGC GCCTGCCGCG
GGTGGTGACC AGACCGCGAC CGAACGCCTG ATCGAACTCG CCGAAAGCTA CAAGGGCAAG
GACACCGTCG CCGAAAAGGC CGCCGAGGAA TGGCGCGGCT GGGATGTCGT GCGCCGCCTG
GAACACGCGC TCGTCAAGGG CATCGATGCC CACGTCGTCG AAGACACCGA AGAGGCCCGC
GCCGCCATCG CCGCGCGCGG CGGTCGCCCG ATCGAGGTGA TCGAAGGCCC CTTGATGGAA
GGCATGAACA CGGTCGGGGA CCTGTTCGGC TCGGGCAAGA TGTTCCTGCC GCAGGTGGTC
AAGTCCGCCC GCGTGATGAA GAAGGCCGTT GCCCACCTTA TCCCCTATAT CGAGGCGGAA
AAGGAAGAAG GCGCCAAGGC CAAGGGCCGG ATCATAATGG CCACCGTCAA GGGCGACGTT
CACGACATCG GCAAGAACAT CGTCGGCGTG GTCCTGCAGT GCAACGGCTA CGAAGTGATC
GATCTGGGTG TCATGGTCCC CTGGGCGACG ATCCTCGACA CGGCGCAGAA GGAAGGCGTC
GACATGATCG GCCTGTCCGG CCTCATCACG CCCTCGCTCG ACGAGATGGT GACCGTTGCC
GAGGAAATGC AGCGCGCCGG GATGAGCATT CCGCTGCTGA TCGGCGGCGC GACCACCAGC
AAGGTCCACA CCGCGCTGCG CATCGATCCT GCCTATGACG GACCTGTCGT CCACGTGCTC
GATGCCAGCC GCGCGGTCGG CGTCGCCTCG CAACTCCTTT CGGATACGCA GGCGCAGGGC
TTCATCAAGG CCACTGCCGC CGATTACCAG CATGTGCGCG ATGCGCGCGC GGGCAAGGGC
GCATCAAAGC TGCTGAGCCT CGAAGACGCC CGGCTGAACG CCTTTTCGCC CGACTTTTCG
GAAAAGGCTC CACCGCCCGA ACAGCCGGGC CGCCACGTGT TCGAAGACTG GGACCTTACC
GACCTTGTCG AGTGCTTCGA CTGGACCCCG TTCTTCCGCT CGTGGGAACT CGCCGGCACA
TGGCCGGCCA TCCTCGACGA TGAAATCGTC GGCGAATCCG CGCGCAATCT CTATGCGGAT
GCCCGCGCGA TGCTCGACAG GATCATCAGC GAGAAATGGC TTACCGCCAA GGGCGTTGCC
CAGTTCTGGC CCTGCGCGCG CCATGGCGAC GACGTCATCC TGCACCCGAA CGACGACGAA
ACATCGGTGC GCCTGCCATT CCTGCGCCAG CAGTTCATCA AGAGCCGTGG CCGCGCGAAC
TTCTGCCTTG CCGACTTCAT CGACCCGGCG GGCGACTGGA TCGGCGGCTT CGCGGTCGGC
ATCCACGGGA TCGACGAACA CCTCGCCCGC TTCAAGGCCG ACAACGACGA TTACTCGGAC
ATCCTGCTGA AGGCCCTTGC CGATCGCTTC GCCGAAGCCT TCGCCGAGCG CCTGCACCAG
TACGTCCGCA CCACCCTCTG GGCCTATGCT CCGGGCGAGC AACTGACCAA TGAGGCGCTG
ATCCGTGAGC AGTACCGCGG CATCCGTCCC GCGCCGGGCT ATCCGGCTTG CCCTGACCAC
ACGCTCAAGC CGATCCTGTT CGACCTGCTC GACGCGACCA ACACGGCCGG CATCACGCTG
ACCGAATCGC AGGCCATGCT GCCCACCTCG GCGGTTTCGG GATTCTACTT CGCCCACCCC
GAAAGCCAGT ACTTCGGTGT CGCCACCATC GGTCGCGATC AACTCGAGGA CTACGCCGCC
CGCCGTGGCT GGGATGTTTC CGCCATGGAA CGCTGGCTTC GCCCCAACCT AGATTGA
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| Protein sequence | MTNTPTGSRF VNVGERTNVT GSAAFKKLIL AGDYAKAVEV ARQQVENGAQ VIDVNMDEGL
LDAVEAMTTF LKLIAAEPDI ARVPVMIDSS KWEVIEAGLK CVSGKPIVNS ISMKEGEDAF
LHHARLCMDY GAAVVVMAFD EKGQADTKER KVEICERAYK LLTGIGFPAE DIIFDPNIFA
VATGIEEHDR YGLDFIEATA EIKARCPHVH ISGGLSNLSF SFRGNETVRR AMHSVFLYHA
IPAGMDMAIV NAGQLDIYDQ IDPVLREACE DVVLNRAPAA GGDQTATERL IELAESYKGK
DTVAEKAAEE WRGWDVVRRL EHALVKGIDA HVVEDTEEAR AAIAARGGRP IEVIEGPLME
GMNTVGDLFG SGKMFLPQVV KSARVMKKAV AHLIPYIEAE KEEGAKAKGR IIMATVKGDV
HDIGKNIVGV VLQCNGYEVI DLGVMVPWAT ILDTAQKEGV DMIGLSGLIT PSLDEMVTVA
EEMQRAGMSI PLLIGGATTS KVHTALRIDP AYDGPVVHVL DASRAVGVAS QLLSDTQAQG
FIKATAADYQ HVRDARAGKG ASKLLSLEDA RLNAFSPDFS EKAPPPEQPG RHVFEDWDLT
DLVECFDWTP FFRSWELAGT WPAILDDEIV GESARNLYAD ARAMLDRIIS EKWLTAKGVA
QFWPCARHGD DVILHPNDDE TSVRLPFLRQ QFIKSRGRAN FCLADFIDPA GDWIGGFAVG
IHGIDEHLAR FKADNDDYSD ILLKALADRF AEAFAERLHQ YVRTTLWAYA PGEQLTNEAL
IREQYRGIRP APGYPACPDH TLKPILFDLL DATNTAGITL TESQAMLPTS AVSGFYFAHP
ESQYFGVATI GRDQLEDYAA RRGWDVSAME RWLRPNLD
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