Gene Saro_3183 details

Gene Information

• Locus tag: Saro_3183
• ID: 3918225
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 3403904
• End bp: 3405715
• Gene Length: 1812 bp
• Protein Length: 603 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640445967
• Product: ABC transporter, ATP-binding/permease protein
• Protein accession: YP_498452
• Protein GI: 87201195
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components
• TIGRFAM ID: [TIGR02204] ABC transporter, permease/ATP-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCAGG AAACACCCGC CCAGGAAACA CCCGCCGCCA ACGTCGAGGA GCCCCCCCGC 
GCCCGCACGC TTGGCCCCCT GCGCATGATC TGGGGCGAGG CGGCGAAATA CCCGGGCCGT 
GTCGCTGCCG CGTCGGCCGC GCTGATCGTC ACGTCCGCCG CGACCCTTGC GATACCGTCG 
GGCTTCCGCC TGATCATCGA CAAGGGCTTT GCCGCCGGCG CGGATGTTTC GGCCATAGGG 
CGATGGTTCC AGTACCTGCT GCTGATCGTG CTGGTCCTTG CCATCGGCAC GGCCTGCCGC 
TTCTACTTCG TGTCCTGGCT GGGCGAGCGC GTGGTTGCCG ACATCCGGCT CAAGGTCCAG 
GCGAACCTGC TGCGCCTGCC CCCGTCGTTC TTCGAGACCA ACAGTCCCAA GGAAATCTCC 
TCGCGGATGA CGTCGGACAC TGCGGTCATC GAACAGGTCG TAGGCACGAC CGTGTCGGTG 
GCGCTGCGCA ACACGATCAC CGCGATCGGG GGCCTGGGCT ACCTGTTCTA CCTTGCGCCG 
AAGCTGACCG CGATCCTGAT GATCGGCATC CCGCTGGTGG TGGGCCCCAT CGTGTTCTTC 
GGCCGCCGCG TGCGCAACGT CTCGCGCTCC AGCCAGGACC GGGTGGCAGT GATCGGCGTG 
ATCGTTTCCG AAGTGCTTGG TGCGATGAAG ATCGTCCAGG CATTCGGGCA GGAGAAGCGC 
GAGCTTGAAC GCTTCGGCGA AAAGGTCGAG GCGACCTTCC AGACCGCGCT GCGCCGCATC 
AGCCTGCGCG CGGTGATGAC CGCGATCGTC ATCCTGCTGG TCTTCGGCGG CATCACCATG 
CTGGTCTGGC AGGGCGCCGT CGGCGTGGCG GAAGGCAGGA TCAGCGGCGG CACGATCTTT 
GCCATCGTCA TCACGGCAGG CCTTGTCGCG GGCGCGCTCG GGGCGCTCTC CGAGGTCTAC 
GGTGACCTGC TGCGCGGGGC CGGCGCCGCA GGACGGCTCA ACGAACTGCT GCGCGAACAG 
CCCGAGATCG CGCCGCCCGC CCGCCCCACG GCGCTGCCGA TCCCGCCGCG CGGGCAGATC 
GCGTTCCAGA ACGTCTCGTT CCGTTATCCC TCGCGCCCGG AAGTTCTTGC GCTCGACGAT 
TTCTCGCTGA CGGTCGAGCC GGGCGAGACC GTCGCCATCG TCGGCCCTTC GGGCGCGGGC 
AAGTCGACGC TCTTCCTGCT GGCACAGCGG TTCTACGATC CGCACGGCGG CACGATCCGC 
ATCGACGGCG TTCCCCTCAC CAGCGCCGAC CCTGCCGAGA TTCGCCAGCG CAGCGCGCTC 
GTACCGCAGG ACGCCACGCT GTTCGCCGCC TCGGCGCGCG ACAACCTGCG CTATGGCAAC 
TGGGGCGCGA GCGACGAGGC CATCTGGGAA GCGGCACGGG CCGCCAATGC CGAACAGTTC 
CTGCGCGACC TGCCGCAGGG CCTCGACACC TTCCTCGGCG AGGATGGCGC GCGCCTTTCC 
GGCGGCCAGC GCCAGCGCAT CGCCATTGCC CGCGCCGTGC TGCGCGAGGC ACCGATCCTG 
CTCCTCGACG AGGCGACCAG CGCCCTGGAC GCCGAAAGCG AGCGCCTTGT CCAGGAAGCT 
CTGGACCGGC TGATGAAGGA ACGCACCACG CTGGTCATCG CGCACCGCCT TGCCACCATC 
CGCGCGGCGG ACCGCATCGT CGTGATGGAC GCGGGCAGGA TTGTCGAACA GGGCACCCAC 
TCCAGCCTGA CGGCAGCGGA TGGCCTGTAT GCCCGCCTGG CGCGGTTGCA GTTCGAAGGG 
CTTGCCGCGT AA 

 

Protein sequence

MAQETPAQET PAANVEEPPR ARTLGPLRMI WGEAAKYPGR VAAASAALIV TSAATLAIPS 
GFRLIIDKGF AAGADVSAIG RWFQYLLLIV LVLAIGTACR FYFVSWLGER VVADIRLKVQ 
ANLLRLPPSF FETNSPKEIS SRMTSDTAVI EQVVGTTVSV ALRNTITAIG GLGYLFYLAP 
KLTAILMIGI PLVVGPIVFF GRRVRNVSRS SQDRVAVIGV IVSEVLGAMK IVQAFGQEKR 
ELERFGEKVE ATFQTALRRI SLRAVMTAIV ILLVFGGITM LVWQGAVGVA EGRISGGTIF 
AIVITAGLVA GALGALSEVY GDLLRGAGAA GRLNELLREQ PEIAPPARPT ALPIPPRGQI 
AFQNVSFRYP SRPEVLALDD FSLTVEPGET VAIVGPSGAG KSTLFLLAQR FYDPHGGTIR 
IDGVPLTSAD PAEIRQRSAL VPQDATLFAA SARDNLRYGN WGASDEAIWE AARAANAEQF 
LRDLPQGLDT FLGEDGARLS GGQRQRIAIA RAVLREAPIL LLDEATSALD AESERLVQEA 
LDRLMKERTT LVIAHRLATI RAADRIVVMD AGRIVEQGTH SSLTAADGLY ARLARLQFEG 
LAA