| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3176 |
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| Symbol | |
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| ID | 3918218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 3392022 |
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| End bp | 3396662 |
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| Gene Length | 4641 bp |
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| Protein Length | 1546 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640445960 |
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| Product | glutamate synthase (NADH) large subunit |
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| Protein accession | YP_498445 |
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| Protein GI | 87201188 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATTTC CGCCGGTTCA GGGCCTGTAT GATCCGCGTA ACGAGCATGA CGCCTGTGGC
GTGGGCTTCA TTGCCCACAT CAAAGGCCAG AAAAGCCATG CCATCGTGGA CCAGGCCCTT
GAGATTCTGC GCAATCTCGA CCACCGCGGC GCGGTGGGCG CCGACCCCTT GCTGGGTGAC
GGTGCGGGCA TCCTGATCCA GATTCCGGAC CAGCTCTTCC GCAGGTGGGC CGCGTCCGAA
GGCAAGGAAC TGCCGCAGCC GGGCGATTAC GCCGTGGCCA TGTGCTTCCT TCCGCAGGAC
GAAGCGTCGC GTCTCTTCGT GACCGAGTTC TTCGAGAAGT TCATCGCCAA GGAAGGCCAG
GAACTGATCG GCTGGCGCGA CGTGCCGACC ACGCTCGACG GCCTCGGCAA AACCGTGATC
GAACAGATGC CGGTCATCCG CCAGTGCTTC ATCAAGCGCG GCCCCGGCAC GCCGGACCAG
GACGCGTTCG AACGCAAGCT GCTGGCGATC CGCAAGCAGA CCCAGAACCC GCTTGCCGCC
ATGGCCGAGA AGCACGGGCT TCCGGGCGTG ACGCAGCTCT ACATGCCGAG CTTCTCGACC
CGCACCATCG TCTACAAGGG CCTGCTGCTG GCGAATCAGG TCGGCTCGTT CTACGACGAT
CTGCGCGATC CGGATTGCGT CTCGGCACTG GGCCTCGTGC ACCAGCGCTT CTCGACCAAC
ACTTTCCCGA GCTGGAAGCT GGCGCACCCG TTCCGCTTCA TCGCCCACAA CGGCGAGATC
AACACCGTTC GCGGCAACGT GAACTGGATG AACGCGCGCC GCCGCACCAT GGAATCCGAG
CTGCTCGGCC CGGATCTCGA CAAGATGTGG CCGCTCATCC CGCACGGTCA GTCGGACACC
GCCAGCCTCG ACAACGCGCT CGAGCTGCTG CTCGCGGGCG GCTACAGCCT GGCCCATGCA
GTGATGATGC TCGTTCCGGA AGCCTGGGCG GGCAACCCGC TGATGGATTC CAGGCGCCGC
GCCTTCTACG AGTACCATGC CGCGCTGATG GAGCCGTGGG ACGGCCCCGC CGCCGTCGCC
TTTACCGACG GTCGCCAGAT CGGCGCAACG CTCGACCGCA ACGGCCTGCG TCCGGCGCGC
TTCTCGATCA CGCGCGACGA CCTGATCTGC ATGGCGTCCG AAAGCGGCGT GCTGCCCTTC
CGTGAGGAAG ACATCGTCCG CAAGTGGCGC CTCCAGCCGG GCAAGATGCT CCTGATCGAC
ATGGATCAGG GCAAGATCAT CGAGGACGAA GAGATCAAGG CCGAGCTGGC CGGCGCCGAA
CCTTACGAGG AATGGCTCGA CCAGGCGCAG TACAAGCTCA AGGAACTCGA CGTGATCGAG
CCCGAGCTGG CCGCGCTCCC GGTCGAGACG ACCTCGCTGC TCGATCGCCA GCAGGCCTTC
GGCTACACCC AGGAAGACGT CACCAAGTTC CTCGAGCCGA TGGCCGTGGC CGGTGACGAT
CCGATCGGGT CGATGGGCAC CGACACGCCG ATCGCGGTGC TGTCGAAGCG CTCGCGCCTG
CTCTACGACT ACTTCAAGCA GAACTTCGCG CAGGTCACCA ACCCGCCGAT CGACCCGATC
CGCGAGGAAC TGGTCATGTC GCTGGTGTCG ATGATCGGTC CGCGCCCGAA CCTGCTCGGC
CATGACGCCG GCAGCCACAA GCGCCTCGAA GTCGACCAGC CGATCCTGAC CAACGACGAG
ATCGCCAAGA TCCGCTCGGT CGAGGCCGCG CTCGACGGTG CCTTCCGCAC CGCCACGATC
GACACGACCT GGGACGCCAA CGCCGGGGCC GACGGCCTCG AGATGGCGAT CAAGGAAATG
TGCTGGGCGG CGACCGAAGC CGTGCTTGCC GACAAGAACA TCCTGATCCT GTCGGACCGC
GCGCAGAACG AGAACCGCAT CCCGATGCCG GCGCTGCTGG CGACGGCGGC GGTGCATCAC
CACCTCGTCC GTCAGGGCCT GCGCATGCAG ACCGGCCTTG TCGTCGAGAC CGGCGAAGCG
CGCGAAGTGC ACCACTTCTG CGTTCTGGCG GGCTATGGCG CCGAAGCCAT CAACCCCTAC
CTCGCGTTCG AGACGCTCGA GGCGATCCGC GTCGACAAGG AACTGCCCCT CACCACCAAG
GAGGTGCAGA AGAACTACAT CAAGGCCATC GGCAAGGGCA TCCTCAAGGT CATGTCCAAG
ATGGGCATCT CGACCTACCA GTCGTACTGC GGTGCGCAGA TCTTCGACGC GGTTGGCCTG
TCGACCGACT TCGTGAACGC CTATTTCACC GGGACGGCGA CGACCATCGA GGGCGTCGGC
CTCAAGGAGA TCGCGGAAGA GACCGTGCGT CGCCACGCCA CGGCCTATGG CGACAACCCG
ATCTACAAGA AGATGCTCGA CGTGGGCGGC ATGTACCAGC TTCGCCTGCG TGGCGAGGAG
CATGCCTGGA CGGCTTCCAA CATTGCCAAC CTGCAGCATG CGGTTCGCGG CAACATGCCG
GAAAAGTACA AGGAGTTCGC CCAGTCGATC AACGACCAGT CCGAACGGAT GCTGACCATC
CGCGGGCTGA TGGACCTGAA GAAGGCCGAC CAGCCGATTT CGATCGACGA GGTCGAGCCC
GCCAGCGAGA TCGTCAAGCG CTTCGCCACG GGTGCGATGA GCTACGGTTC GATTTCGTGG
GAAGCGCACA CCACGCTGGC GCTCGCGATG AACCGCATCG GCGGCAAGTC GAACACCGGC
GAAGGCGGCG AGGATCCCGC GCGCTTCAAG CCGCTGCCCA ACGGCGATTC GATGCGTTCG
GCGATCAAGC AGGTGGCCTC GGGCCGTTTC GGCGTGACCG CGGAATACCT CGTCAATGCC
GATGACGTGC AGATCAAGAT GGCGCAGGGC GCAAAGCCCG GCGAGGGCGG CCAGCTTCCC
GGCGACAAGG TCGACAAGAC CATCGGCAAG ACCCGTCATT CCACGCCGGG CGTCGGCCTG
ATCTCGCCGC CGCCGCACCA CGACATCTAC TCGATCGAAG ACCTCGCGCA GCTCATTCAC
GATCTCAAGA ACGTGAACAC CGGCGCGCGC ATCTCGGTCA AGCTGGTGTC CGAAGTGGGC
GTCGGCACGG TTGCCGCGGG CGTTTCCAAG GCGCGCGCGG ACCACGTGAC GATTTCGGGC
TACGAAGGCG GCACGGGCGC GTCGCCGCTG ACCTCGCTGA CCCACGCCGG TTCGCCCTGG
GAAATCGGCC TTGCCGAAAC CCAGCAGACG CTGCTGCTCA ACAACCTGCG CAGCCGCATC
TGCGTCCAGG CCGATGGCGG CCTGCGCACC GGTCGTGACG TCGCCATCGC CGCGCTGCTC
GGCGCCGACG AGTTCGGCTT TGCCACCGCG CCGCTGATCG CGGCCGGCTG CATCATGATG
CGCAAGTGCC ACCTCAACAC CTGCCCGGTC GGCGTTGCCA CCCAGGACCC GGTGCTGCGC
GCGCGCTTCA CCGGCCAGCC GGAACATGTG ATCAACTACT TCTTCTTCGT CGCCGAGGAA
CTGCGCGCGA TCATGGCCGA GATGGGCTTC CGCACCATCG CGGAAATGGT CGGCCGCGTC
GATCGCCTCG ACACCAAGAA GGCGATCAGC CACTGGAAGG CGCAGGGCGT CGACCTGTCG
AAGCTGCTGC ACAAGGTCGA CCCGGTCCCC GGCACGACCC TGAACTGGAG CGAGACGCAG
GATCACGGCC TCGAGGCCGC GCTCGACAAC GACCTCATCG CCGCCAGCGC CCCGGCGCTC
GAAAAGGGCG AGCCGGTCCG CCTCGAACGC AACGTCATCA ACGTCAACCG CACGGTCGGC
GCGATGCTCT CGGGCGAAGT GGCCAGGAAG TACGGGCACA AGGGCCTGCC GGACAACACC
ATCCACGTCG CGTTCAAGGG CGTGGCTGGC CAGTCGTTCG GTGCGTTCCT CGCGCATGGC
GTGACGCTCG ATCTCGTCGG CGATGCCAAC GACTATGTCG GCAAGGGCCT CTCGGGCGGT
CGCGTGATCG TGCGCCAGCC CGGCCACGTC GATCGTGACC CGACCGAGAA CATCATCGTC
GGCAACACCG TGCTCTACGG CGCGATCGCG GGCGAGGCCT ACTTCAACGG CGTGGGCGGC
GAACGCTTCG CGGTGCGCAA CTCCGGCGCT CTCGCGGTGG TCGAAGGCAC CGGCGATCAT
GGCTGCGAAT ACATGACCGG CGGCGTCGTC GTCGTGCTCG GCCGGACCGG GCGCAACTTC
GCGGCGGGCA TGTCGGGCGG CGTGGCCTAT GTCTACGACG TGGACGGCAA CTTCGCGAGC
CTCGTCAACG GCGCGATGGT CGATGTTCTG CCGGTCTCGG CGGAACGCGA CGAGGAAGAC
GGTGCGGGCC GTCCTCAGCA GCGCGGGACG GACGTCTATG ACCAAGGCAT GGGCGACATG
CTGCGTCACG ACGCCGAACG CCTGCGGGTG CTGGTGGAAC GCCACCACCT CTACACCGGC
AGCGCGCGCG CTCGCGAGAT CCTCGACAAC TGGGTCGAGG CTCTGCCGCG TTTCGTCAAG
GTCATGCCGC GCGATTATGC GCGTGCGCTC CGCCAGATGG AGGCAGAGCG CCTCGAAGCC
GCCTCCGTGG CGGCCGAGTA A
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| Protein sequence | MGFPPVQGLY DPRNEHDACG VGFIAHIKGQ KSHAIVDQAL EILRNLDHRG AVGADPLLGD
GAGILIQIPD QLFRRWAASE GKELPQPGDY AVAMCFLPQD EASRLFVTEF FEKFIAKEGQ
ELIGWRDVPT TLDGLGKTVI EQMPVIRQCF IKRGPGTPDQ DAFERKLLAI RKQTQNPLAA
MAEKHGLPGV TQLYMPSFST RTIVYKGLLL ANQVGSFYDD LRDPDCVSAL GLVHQRFSTN
TFPSWKLAHP FRFIAHNGEI NTVRGNVNWM NARRRTMESE LLGPDLDKMW PLIPHGQSDT
ASLDNALELL LAGGYSLAHA VMMLVPEAWA GNPLMDSRRR AFYEYHAALM EPWDGPAAVA
FTDGRQIGAT LDRNGLRPAR FSITRDDLIC MASESGVLPF REEDIVRKWR LQPGKMLLID
MDQGKIIEDE EIKAELAGAE PYEEWLDQAQ YKLKELDVIE PELAALPVET TSLLDRQQAF
GYTQEDVTKF LEPMAVAGDD PIGSMGTDTP IAVLSKRSRL LYDYFKQNFA QVTNPPIDPI
REELVMSLVS MIGPRPNLLG HDAGSHKRLE VDQPILTNDE IAKIRSVEAA LDGAFRTATI
DTTWDANAGA DGLEMAIKEM CWAATEAVLA DKNILILSDR AQNENRIPMP ALLATAAVHH
HLVRQGLRMQ TGLVVETGEA REVHHFCVLA GYGAEAINPY LAFETLEAIR VDKELPLTTK
EVQKNYIKAI GKGILKVMSK MGISTYQSYC GAQIFDAVGL STDFVNAYFT GTATTIEGVG
LKEIAEETVR RHATAYGDNP IYKKMLDVGG MYQLRLRGEE HAWTASNIAN LQHAVRGNMP
EKYKEFAQSI NDQSERMLTI RGLMDLKKAD QPISIDEVEP ASEIVKRFAT GAMSYGSISW
EAHTTLALAM NRIGGKSNTG EGGEDPARFK PLPNGDSMRS AIKQVASGRF GVTAEYLVNA
DDVQIKMAQG AKPGEGGQLP GDKVDKTIGK TRHSTPGVGL ISPPPHHDIY SIEDLAQLIH
DLKNVNTGAR ISVKLVSEVG VGTVAAGVSK ARADHVTISG YEGGTGASPL TSLTHAGSPW
EIGLAETQQT LLLNNLRSRI CVQADGGLRT GRDVAIAALL GADEFGFATA PLIAAGCIMM
RKCHLNTCPV GVATQDPVLR ARFTGQPEHV INYFFFVAEE LRAIMAEMGF RTIAEMVGRV
DRLDTKKAIS HWKAQGVDLS KLLHKVDPVP GTTLNWSETQ DHGLEAALDN DLIAASAPAL
EKGEPVRLER NVINVNRTVG AMLSGEVARK YGHKGLPDNT IHVAFKGVAG QSFGAFLAHG
VTLDLVGDAN DYVGKGLSGG RVIVRQPGHV DRDPTENIIV GNTVLYGAIA GEAYFNGVGG
ERFAVRNSGA LAVVEGTGDH GCEYMTGGVV VVLGRTGRNF AAGMSGGVAY VYDVDGNFAS
LVNGAMVDVL PVSAERDEED GAGRPQQRGT DVYDQGMGDM LRHDAERLRV LVERHHLYTG
SARAREILDN WVEALPRFVK VMPRDYARAL RQMEAERLEA ASVAAE
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