Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2846 |
Symbol | |
ID | 3915485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 3070572 |
End bp | 3073286 |
Gene Length | 2715 bp |
Protein Length | 904 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640445625 |
Product | valyl-tRNA synthetase |
Protein accession | YP_498116 |
Protein GI | 87200859 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.292827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGACC AAACGCGCGC GCAGACTTCA GCGGAACTTT CGAAGACCTT CGAGCCGGCC GGCATCGAGG CGAAATGGTA TGCCCATTGG GAAGCGAACG GCCTGTTCCG GCCCGAGCGC CCGGACGCGC AGCCCTATAC CATCGTCAAC CCGCCGCCGA ACGTCACCGG CTCGCTCCAT ATCGGCCACG CGCTGGACAA CACCTTGCAG GACGTGGCGA TCCGCTATGA ACGCCTGCGC GGCAAGGACG CGTTGTGGGT GGTGGGCATG GACCACGCCG GCATCGCCAC GCAGATGGTG GTCGAACGCC AGATGGAAGC GCGCCAGGAC AAGCGCACCA ACTACACCCG CGAGCAGTTC GTCGAGAAGG TGTGGGAGTG GAAGGCCGAA AGCGGCGGCG CGATCACCGG CCAGCTTCGC CGCCTCGGCT GCTCGATGGA CTGGAGCCGC GAGCAGTTCA CGATGGACCC GCACTTCACC CGCGCGGTGG TGAAGGTGTT CGTCGACCTG TATAACCAAG GCCTGATCTA CCGCGACAAG CGGCTGGTGA ACTGGGACCC GAAGCTGAAG ACCGCGATCT CGGACCTCGA GGTGGAAACG CGCGAGGTTC AGGGCGGGTT CTGGCACTTC AAGTACCCGC TGGCGGACGG CGTGAAGCGC GACGATGGCC TCGATTACAT CGAGGTCGCG ACGACGCGCC CCGAGACGAT GCTGGCCGAC ATGGCCGTGG CGGTGCATCC CGAGGACGAG CGGTACAAGT CGATCATCGG CAAGGAAATC CTGCAACCGC TGACCGGACG CCGGTTCAAG GTGGTGGCCG ACGAGCACGC CGATCCCGAA CTGGGATCGG GCGCGGTGAA GATCACGCCG GGACATGACT TCAACGACTT CGAAGTCGGC AAGCGCGCCG GAATCAAGCC CGCCGACATG CTCAACATGT TCGATGCCGA GGCAAAGGTC GTGCAGACGG CGGACGGCCT GGTGCCGGAA GAGTTCGTCG GCATGGACCG CTTCGATGCA CGCAAGCTCG TCGTGGAAAG GATGAAGGAA CAGGGCTTCC TGATCCCGCA CGTGACGAAG GACAAGGAAG GCAACGAGGT TCAGCACGAT GCCGAGCCGC GCACGATCCA GACGCCCTTC GGCGATCGCG GCGGCGTGGT GATCGAGCCG TGGCTGACCG ACCAGTGGTA CGTCGATGCC GAGACGCTTG CCAAGGCGCC GATGGAAGCG GTGCGTTCGG GCGCCATCGA GATCGTGCCC AAGACCTGGG AAAAGACCTT CTTCAACTGG ATGGAGAACA TCCAGCCCTG GTGCGTCAGC CGCCAGCTGT GGTGGGGGCA CCGGATTCCG GCGTGGTATG GCTCGGACGG GCAGTGCTAC GTGGCCGAGT CCGAAGAGGA AGCGCAGGCC AAGGCGGGCG CGGACGTGAC GCTGACCCGT GACGAGGACG TGCTCGACAC CTGGTTCTCC TCCGCGCTGT GGCCTTTCGC CACGCTGGGC TGGCCGGATG AAGACGCGCC GCTGCTGAAG AAGCACTATC CCAACGACCT GCTCGTCTCG GGCTTCGACA TCCTGTTCTT CTGGGATGCG CGCATGGCGA TGCAGGGCCT GCACTTCATG AAGGAAGTGC CGTGGAAGAA GCTCTACCTG CACGGCCTCG TCCGCGCGGC CGATGGCGCG AAGATGTCGA AGTCGAAGGG CAACGTGGTC GATCCGCTGG GCCTGATCGA CAAGTACGGC GCCGATGCGC TGCGCTTCTT CATGTGCGCG ATGGAGAGCC AGGGCCGCGA CGTGAAGATG GACGAGAAGC GCGTCGAGGG TTACCGCAAC TTCGCCACGA AGCTGTGGAA CGCCGCGCGC TTCTGCCAGA GCAATGGCAT CACCGGCAGC ACTTCGGTCG CGGCTCCGGC AGCAACCTCG GCCGTCAACA AATGGATCAT CGGCGAAGTG GTGGAAACCG TCGCCGCGCT TGACCAGGCA ATGGCCGACC TGCGCTTCGA TGCGGCGGCC AACGCGATCT ACCACTTCGT CTGGGACCAG TTCTGCGACT GGTACATCGA ACTGATCAAA GGCAGCTTCG ACACCGAAAC CAAGGCCGTG GCCGGCTGGG TGCTCGACCA GATCCTCGTC ATGCTCCACC CGTTCATGCC CTTCGTGACC GAGGAATTGT GGCATGCGCT TGGTGAGCGC GACGGCGAAC TGATCGTCGC CGCGTGGCCC AAGCCGGAAG CGGCGGTCGA TGCGGCGGCC AAGCGCGAGG TCGAATGGCT GATTGCGCTG GTCTCGAACC TGCGCACCGC CAAGAACGAA CTGGGCATCG CACCGGGCGC CAAGCTCGAC GCCTACCTGC CCGAACCGTC GGCGCAGACG CGCGGGATCA TCAAGGCCAA TCCGGCGGCG ATCGAGCGCC TTGCACGCCT GAACGGCATC CGTTTCGAGG CGGCCCCCGC AGGCGCCGCG ATGCAGGTGG GCGCTGGCGA CGCCAATATC GTCGTGCCGC TGGAAGGCGT GATCGACATC GCGGCGGAGA AGGCGCGGCT GGAAAAGGCG CTGGCCGTCT CGCAGAAGGA AGCGAAGTCG CTCGAAGGGC GGCTCTCCAA CCCCTCGTTC GTCGAGAAGG CCAAGCCCGA GGCGGTAGAG AAGGCCCGCG CCGACCACGC CATGCACGCC GCCGAGGCCG AACGGCTCGC AGCGGCGCTG GCACGGCTGG GGTGA
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Protein sequence | MNDQTRAQTS AELSKTFEPA GIEAKWYAHW EANGLFRPER PDAQPYTIVN PPPNVTGSLH IGHALDNTLQ DVAIRYERLR GKDALWVVGM DHAGIATQMV VERQMEARQD KRTNYTREQF VEKVWEWKAE SGGAITGQLR RLGCSMDWSR EQFTMDPHFT RAVVKVFVDL YNQGLIYRDK RLVNWDPKLK TAISDLEVET REVQGGFWHF KYPLADGVKR DDGLDYIEVA TTRPETMLAD MAVAVHPEDE RYKSIIGKEI LQPLTGRRFK VVADEHADPE LGSGAVKITP GHDFNDFEVG KRAGIKPADM LNMFDAEAKV VQTADGLVPE EFVGMDRFDA RKLVVERMKE QGFLIPHVTK DKEGNEVQHD AEPRTIQTPF GDRGGVVIEP WLTDQWYVDA ETLAKAPMEA VRSGAIEIVP KTWEKTFFNW MENIQPWCVS RQLWWGHRIP AWYGSDGQCY VAESEEEAQA KAGADVTLTR DEDVLDTWFS SALWPFATLG WPDEDAPLLK KHYPNDLLVS GFDILFFWDA RMAMQGLHFM KEVPWKKLYL HGLVRAADGA KMSKSKGNVV DPLGLIDKYG ADALRFFMCA MESQGRDVKM DEKRVEGYRN FATKLWNAAR FCQSNGITGS TSVAAPAATS AVNKWIIGEV VETVAALDQA MADLRFDAAA NAIYHFVWDQ FCDWYIELIK GSFDTETKAV AGWVLDQILV MLHPFMPFVT EELWHALGER DGELIVAAWP KPEAAVDAAA KREVEWLIAL VSNLRTAKNE LGIAPGAKLD AYLPEPSAQT RGIIKANPAA IERLARLNGI RFEAAPAGAA MQVGAGDANI VVPLEGVIDI AAEKARLEKA LAVSQKEAKS LEGRLSNPSF VEKAKPEAVE KARADHAMHA AEAERLAAAL ARLG
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