| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2680 |
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| Symbol | |
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| ID | 3918454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 2918345 |
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| End bp | 2919967 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640445457 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_497950 |
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| Protein GI | 87200693 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTGT CTCATTCTGA TGGATTGGAT CGAAACATGA CCAAGCCTAA AGTCCTGATT
TCCGACAAGA TGGACCCCAA CGCCGCCCGC ATCTTCACCG AGATGGGCTG CGACGTCGAT
GTGATCACCG GCGAGACGCC GGAACAGCTC ATCGCCCGCA TCGGCGAGTA CGATGGCCTT
GCCATCCGTT CCTCGACCAA GGTGACCAAG GCGATCCTCG ATGCCGCCAC CAACCTCAAG
GTCATCGGCC GCGCCGGCAT CGGCGTCGAC AACGTCGATA TCCCGGCAGC ATCGGCGCAG
GGCGTGGTGG TCATGAACAC CCCGTTCGGC AACTCGATCA CCACTGCCGA ACACGCCATC
GCGATGATGT TCGCGCTCGC GCGGCAGATC CCCGAAGCCA ACGCCCAGAC CCAGGCGGGC
CTGTGGCCGA AGAACGGCTT CATGGGCGTT GAAGTCACCG GCAAGACGCT CGGCCTGATC
GGCGCGGGCA ACATCGGCTC GATCGTCGCC TCGCGTGCGC TGGGCCTGAA GATGAAGGTC
GTTGCCTTCG ACCCGTTCCT GACGCCCGAA CGCGCCGTGG AAATGGGTGT CGAGAAGGCC
GATCTCGAAA CGCTGCTGGC CAAGGCGGAC TTCATCACGC TGCACACGCC TCTGACCGAC
CAGACCCGCA ACATCCTCAG CCGCGAGAAC ATCGCCAAGT GCAAGAAGGG CGTGCGCATC
ATCAACTGCG CGCGTGGCGG TCTCGTCGAT GAAGCCGCCC TCAAGGACGC GCTCGATTCC
GGCCACGTCG CCGGCGCCGC GCTCGACGTG TTCGAGACCG AGCCCGCCAA GGAATCGCCG
CTGTTCGGCA CCCCGAACTT CATCTGCACC CCGCACCTGG GCGCGAGCAC GACCGAAGCG
CAGGTCAACG TGGCGCTCCA GGTGGCCGAG CAGATGGCGG ACTTCCTCGT CACCGGCGGC
GTCACCAACG CGCTCAACAT GCCTTCGCTC TCGGCCGAGG AAGCGCCGAA GCTGCGCCCC
TACATGGCGC TGGCCGAAAA GCTGGGCAGC CTCGTCGGCC AGCTTGCGCA CGACAACCTC
ACCAAGATCG CCATCGAGGT CGAGGGCGCT GCCGCGCAGC TCAACCAGAA GCCGATCACC
GCGGCTGTCC TGGCCGGCCT GATGAAGCAG TATTCGCAGA CCGTGAACAT GGTCAACGCG
CCGTTCCTCG CCAAGGAACG CGGGCTGGAC GTTCGCGAAG TGCGCCATGA CCGCGAGGGC
GAATACCGCA CGCTGGTGCG CGTCACCGTC AGCACTTCGC AGGGCGAACG TTCGGTGGCC
GGCACGCTGT TCGGCAACGG CCAGCCGCGC CTCGTCGAGA TCTTCGGCAT CGGCATCGAG
GCCGACCTCG ACGGCGACAT GCTCTACATC GTCAACTCCG ACGCGCCCGG CTTCATCGGC
CGCATCGGCA CGCTGCTGGG TCAGAACACG ATCAACATCG GCACCTTCCA CCTCGGCCGC
CGCGAAGCTG GTGGCGAGGC CGTGCTGCTG CTGTCGCTCG ACAACCCGGT CAGCGAGGAC
GTTCTCAAGG AAGCTCGCGA AATCCAGGGC GTTCGGGTCG TCAAGGCGCT CAAGTTCGCC
TGA
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| Protein sequence | MTVSHSDGLD RNMTKPKVLI SDKMDPNAAR IFTEMGCDVD VITGETPEQL IARIGEYDGL
AIRSSTKVTK AILDAATNLK VIGRAGIGVD NVDIPAASAQ GVVVMNTPFG NSITTAEHAI
AMMFALARQI PEANAQTQAG LWPKNGFMGV EVTGKTLGLI GAGNIGSIVA SRALGLKMKV
VAFDPFLTPE RAVEMGVEKA DLETLLAKAD FITLHTPLTD QTRNILSREN IAKCKKGVRI
INCARGGLVD EAALKDALDS GHVAGAALDV FETEPAKESP LFGTPNFICT PHLGASTTEA
QVNVALQVAE QMADFLVTGG VTNALNMPSL SAEEAPKLRP YMALAEKLGS LVGQLAHDNL
TKIAIEVEGA AAQLNQKPIT AAVLAGLMKQ YSQTVNMVNA PFLAKERGLD VREVRHDREG
EYRTLVRVTV STSQGERSVA GTLFGNGQPR LVEIFGIGIE ADLDGDMLYI VNSDAPGFIG
RIGTLLGQNT INIGTFHLGR REAGGEAVLL LSLDNPVSED VLKEAREIQG VRVVKALKFA
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