| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2533 |
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| Symbol | |
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| ID | 3916854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2734524 |
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| End bp | 2736611 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640445290 |
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| Product | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA |
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| Protein accession | YP_497803 |
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| Protein GI | 87200546 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.487368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCGCC AGTACGAACT TGTCGAACGT GTGCTCGCCT ACGATCCGGA TGCGGACGAG
GCGATGCTCA ACCGCGCCTA TGTCTATACC GTCCAGAAGC ACGGCACCCA GAAGCGCGCC
AGCGGCGACC CCTATTTCTC GCACCCGGTC GAAGTCGCGG GCCTGATGAC CGAGCTGAAG
CTCGACCAGG ACACGATCAT CACCGCGCTG CTCCACGATA CGGTCGAGGA CACGCTGACC
ACGGTGGAGG ACATCGAGCG TCTGTTCGGC CCCGACGTTG CCCGGCTGGT CGACGGCGTG
ACCAAGCTCT CCAAGATCGA GACGATGAGC GAGAGCGAGC GCGCGGCCGA AAACCTGCGC
AAGTTCCTCC TGGCGATGAG CGAGGACCTG CGCGTCCTTC TCGTCAAGCT CGCCGACCGC
ATGCACAACA TGCGCACGCT CCACTACATC AAGAGCGAGG AAAAGCGCCG CCGCATCGCG
CGCGAGACCA TGGATATCTA TGCCCCGCTG GCAGAGCGGG TGGGCATGTA CGAGTACATG
CGCGAGATGC AGCTTCTGGC TTTCGAGCAG CTTGAACCGG AAGCCTATGC CACGATCACC
GGCCGCCTTG CCGCGATCCG CAGCGAGGAA GGCGCGCAGG TCGATGCCAT CGCGCTCGAG
ATCAAGAAGG CGCTGGCCGA GGCGGGCCTG CGGGTCGAGG TCTCGGGCCG CGAGAAGCAT
CCCTATTCGA TCTGGCGCAA GATGGCCGAG CGGCACGTGT CGTTCGAGCA GATCACCGAC
ATCATGGCGT TCCGCGTCCT CACCGACGAC GAGGACGACT GCTACAAGGC GCTGGGCATC
CTCCACCGGG CGTGGCAGAT GATCCCGGGG CGCTTCAAGG ACTACATCTC CACGCCGAAG
ATGAACGGCT ATCGTTCGCT CCACACGGCG CTGATCTATT CCAACGCCAT GCGCGTCGAG
GTGCAGATCA AGACGCGCGA CATGCACGAA CGCAACGAGT TCGGCCTCGC GGCGCACTGG
GCCTACAAGC AGGGTGGCAA GCCCGACGGG CAGGTCGGCT GGCTGCGCGA CCTGATCGAA
ATCCTCGAAT CCAGCCACGA TGCCGAGGAA CTGCTCGAAA ACACCAAGAT GGCGATCTAC
CAGGATCGCA TCTTCGCCTT CACCCCCAAG GGTTCGCTGT TCCAGCTGCC CAAGGGCGCG
ACGCCGATCG ACTTCGCCTT TGCCGTCCAT ACCAACCTCG GCGCGCAGGC AGTCGGGGCC
AAGATCAACG GCCGCCACGT GCCACTGCGC ACGCCGCTGG GCAATGGCGA CGTGGTCGAG
ATCATCAAGA GCCGCACTTC CGAACCGCAG CTCTCGTGGC TCGGTTTCGT CGTGACCGGC
AAGGCCCGCG CCGCAATCCG CCGCTTCGTC CGGCAGAAGG AGCGCGCCGA AGTGGCCGCC
ATCGGCCGCA AGCTCTACGA GGAAATCGTC GAGCGGCTGC CCACGAAGAT CGGCAAGAAG
GCGCTGGCCG ATGCGCTCAA GCGGCTGAAG ATGGCCTCGG AGGAGGACTT CATGTTCGCC
ATCGGCGCGG CCAAGCTGGA TGACCGGCAG GTGATGGAAG CGCTCGTGCC GGGAAGCGCG
GCCAACATTC CCGAGGAGAA CTGGCCCAGC CAGCGCCGCG CCATCGCGGT GCGCGGGTTG
ACGCCGGGCA TGGCCTTCAA GCTCGCCGCC TGCTGCCACC CCGTGCCGGG CGACCGCATC
GTCGGCCTGC GTCGCCCCGG CAAGGGGGTC GAGGTCCACG CGATCGACTG CATGAAGCTG
GCCGACGGCA TCGACGCCGA CTGGATCGAC CTTTCGTGGG ACGCGCGCAC CGATGGCGCG
ATCGGCCGGG TGCGCGCCGA ACTGTACAAC CGCCCCGGCA CGCTCGCCGA AATGGCGGGC
ATCTTCGCCA AGAACCACGC CAATGTCGTC AATCTCGAGA TGACCCAGCG CGAGAACCCG
TTCCACACCT ACGAGGTGGA CCTCGAGGTG CGCGACCTGG CGCACCTCAC CCGGATCATC
AGCGCCTTGC GCGCCAGCGA CGCGGTGGCT CAGGCAGAGC GGATCTGA
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| Protein sequence | MLRQYELVER VLAYDPDADE AMLNRAYVYT VQKHGTQKRA SGDPYFSHPV EVAGLMTELK
LDQDTIITAL LHDTVEDTLT TVEDIERLFG PDVARLVDGV TKLSKIETMS ESERAAENLR
KFLLAMSEDL RVLLVKLADR MHNMRTLHYI KSEEKRRRIA RETMDIYAPL AERVGMYEYM
REMQLLAFEQ LEPEAYATIT GRLAAIRSEE GAQVDAIALE IKKALAEAGL RVEVSGREKH
PYSIWRKMAE RHVSFEQITD IMAFRVLTDD EDDCYKALGI LHRAWQMIPG RFKDYISTPK
MNGYRSLHTA LIYSNAMRVE VQIKTRDMHE RNEFGLAAHW AYKQGGKPDG QVGWLRDLIE
ILESSHDAEE LLENTKMAIY QDRIFAFTPK GSLFQLPKGA TPIDFAFAVH TNLGAQAVGA
KINGRHVPLR TPLGNGDVVE IIKSRTSEPQ LSWLGFVVTG KARAAIRRFV RQKERAEVAA
IGRKLYEEIV ERLPTKIGKK ALADALKRLK MASEEDFMFA IGAAKLDDRQ VMEALVPGSA
ANIPEENWPS QRRAIAVRGL TPGMAFKLAA CCHPVPGDRI VGLRRPGKGV EVHAIDCMKL
ADGIDADWID LSWDARTDGA IGRVRAELYN RPGTLAEMAG IFAKNHANVV NLEMTQRENP
FHTYEVDLEV RDLAHLTRII SALRASDAVA QAERI
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