| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2511 |
|---|
| Symbol | |
|---|
| ID | 3916832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 2715476 |
|---|
| End bp | 2716702 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640445268 |
|---|
| Product | acyl-CoA dehydrogenase-like |
|---|
| Protein accession | YP_497781 |
|---|
| Protein GI | 87200524 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTCG AACACTCCGA CAAGGTCAAG AACCTCCTCG CCCGCCTCGA AGCCTTCATG
GACGAGCACA TCTACCCGGT CGAACAGGCC TACTATGATT TCGTCCATGA TCAGCAGAAC
CTCTGGGCCG AATGGCCGGG GATGGAACCG CTCAAGGAAA AGGCGCGCGC AGCAGGCCTG
TGGAACCTGT TCCTGCCGCA CGAGTACGGC GCATGGTCAC CCGGCCTCAC CAACCTCGAA
TATGCCCCGC TGGCCGAAGT CATGGGCCGG GTGCCGTGGT CCAGCCAGGT GTTCAACTGC
TCCGCGCCCG ATACCGGCAA CATGGAAGTG CTGGCCAAGT TCGGCAGCCC CGAACAGCAG
GAACTCTGGC TGAAGCCGCT CCTCGCCGGG GAAATCCGCT CCGCCTACGT GATGACCGAA
CCGCAGGTCG CCTCCTCGGA TGCAACCAAT CTCGAACTCT CGATCATCCC TGATGGCGAC
GAATACGTGA TAAACGGTCG CAAGTGGTGG ATCTCGAACG CGATGCACCC GCGCTGCGAG
ATCATGATCG TCATGGGCAA GACCTTCTTC GAAGGGCCGC GCCACAGCCA GCACTCGCAG
ATCCTCGTTC CCCGCGATAC GCCGGGCGTC ACCGTGGTGC GCCACCTCAA GGTCTTCGGC
TCCAGCAATT CTCCCGGCGG TGAAGTGGAA CTGCGCTTCG ACAACGTCCG CGTGCCGAAG
CAGAACATGA TCCTTGGAGA AGGTCGCGGC TTCGAGATCG CGCAGGGGCG CCTCGGGCCG
GGCCGTATCC ACCACTGCAT GCGCTCGATC GGCCAGGCCC AGCGCGCACT CGAATGGATG
GCCCGCCGCG CCGATTCCCG CGTCGCATTC GGCAAGAAGC TCGCCGATCA GTCGAGCGTC
CGGCAGGACG TCGCCCGCTC GTTCTGCGAG GTGGAGATGG CGCGCCTGCT GACCCTCAAG
GCCGCCGACG CCATGGATCG TCTCGGCAAC AAGGCCGCGC GCGACCTCAT CGCCGCGATC
AAGGTCGTCG CCCCGTCGAT GGCCCAGCAG GTGGCCGACC GCGCGATCCA GGTCCACGGC
GGCATGGGCG TCAGCGAGGA TGGCCCGATG GCCTACTTCT TCACGCTCAA CCGCTACGTC
CGCCTCACCG ATGGGCCGGA GGAAGTGCAC ATGAGCCAGC TCGGCAAGAT CAAGATCGCC
GAATACGTCG CCTCCAACGC ACGCTGA
|
|---|
| Protein sequence | MQFEHSDKVK NLLARLEAFM DEHIYPVEQA YYDFVHDQQN LWAEWPGMEP LKEKARAAGL
WNLFLPHEYG AWSPGLTNLE YAPLAEVMGR VPWSSQVFNC SAPDTGNMEV LAKFGSPEQQ
ELWLKPLLAG EIRSAYVMTE PQVASSDATN LELSIIPDGD EYVINGRKWW ISNAMHPRCE
IMIVMGKTFF EGPRHSQHSQ ILVPRDTPGV TVVRHLKVFG SSNSPGGEVE LRFDNVRVPK
QNMILGEGRG FEIAQGRLGP GRIHHCMRSI GQAQRALEWM ARRADSRVAF GKKLADQSSV
RQDVARSFCE VEMARLLTLK AADAMDRLGN KAARDLIAAI KVVAPSMAQQ VADRAIQVHG
GMGVSEDGPM AYFFTLNRYV RLTDGPEEVH MSQLGKIKIA EYVASNAR
|
|---|
| |