Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2484 |
Symbol | |
ID | 3916804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 2686189 |
End bp | 2687103 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640445240 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_497754 |
Protein GI | 87200497 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.468436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCGACG GCTGGATCAT CCTCGACAAG CCTCTGGAAC TCGGGTCGAC TCAAGGGGTT GCGGCGGTAA AGCGCAATCT GCGGCAGGCC GGCTACGGCA AGTGCAAGGT CGGACACGGC GGGACGCTCG ACCCCCTGGC TACCGGGGTG CTTCCGATCG CGGTGGGCGA GGCGACGAAA CTGTGCGGAC GGATGCTCGA TGCGAGCAAG GTCTATGCTT TCACGGTGGC CTTCGGAACG GAGACCGACA GCCTCGATCT GGAGGGCGGA ATCGTCGCCA CCAGCGACGT CCGGCCGCCT CTTGCGGACG TTCATGTCAC TTTAGGTGCG TTTCGGGATT CCATCGATCA GGTTCCCCCG GCGTACTCGG CCCTGATGGT CGAGGGCAGG CGCGCCTATG ATCTCGCAAG GGCGGGCGAA ACAGTCGAAC TGCCCTCGCG CCGGGTCACG ATCCATGCAC TCACGCTCGA TTCGTGGACA GGAAGCGAGG GCGCGGTGGA AACGGCGACG CTGACCGCGC ACGTTTCGAA AGGCACATAC ATCCGCAGCC TGGCCCGCGA TATCGCGCGC GCGCTGGGCA CGGTGGGCCA TGTGACGATG CTGCGACGGC TCAAGGCGGG GCCGTTCGCC ATCGAGCAGG CGATTTCGCT GGACAAATTG AACGCATTGG GTCAAGGCGC GCCCCTTGAA CACGTACTCT TGCCGCTGGA GGCAGGGCTG GTCGACATCC CGGCTCTTGA CCTTGATCCC GAGCAGGCGA GGGCGGTCCG TCAGGGCCGC GTTCTGACGG GATTGCCCTT CGAGGACGGG CTCTACTGGG CGAGGCTTGG CACTGTGCCG GTCGCGCTGG TCGAGCTTTC CGACGGAAAC CTGAAGGTTT CGCGGGGCTT CAACTTACAG GATGTCGCGG AGTAG
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Protein sequence | MVDGWIILDK PLELGSTQGV AAVKRNLRQA GYGKCKVGHG GTLDPLATGV LPIAVGEATK LCGRMLDASK VYAFTVAFGT ETDSLDLEGG IVATSDVRPP LADVHVTLGA FRDSIDQVPP AYSALMVEGR RAYDLARAGE TVELPSRRVT IHALTLDSWT GSEGAVETAT LTAHVSKGTY IRSLARDIAR ALGTVGHVTM LRRLKAGPFA IEQAISLDKL NALGQGAPLE HVLLPLEAGL VDIPALDLDP EQARAVRQGR VLTGLPFEDG LYWARLGTVP VALVELSDGN LKVSRGFNLQ DVAE
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