Gene Saro_2454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2454 
Symbol 
ID3916773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp2645737 
End bp2646387 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content63% 
IMG OID640445209 
ProductTetR family transcriptional regulator 
Protein accessionYP_497724 
Protein GI87200467 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGT CCAGCACCGC CGCCAAGCCG CGTCAACGTG CCGCCGGCGC GCCTACCGGG 
CGCGAGATCA AGCCCGGTGT CGTCGCGTTC AAGCGGGCCC GCATTCTCGA AGAGGCCGCT 
GCGCTGTTCT TCGAGAAGGG GTACGAGGCG GCGACGCTGG AAATGCTCGC CGACCGGCTG 
AGCGCGACCA AGCCGTTTCT CTATACCTAC TTCAGGGGCA AGGCAGCGAT CCTGTGCGCC 
ATATGCGAAC TCGGCGTGAC CGAATCGCTC GCGGCGCTGG ACAGGATCGC GGAAACGGAA 
AGGACGTCGA TAGACCTGCT CAAGGCTTCG CTCCGCGAAG TCGCGGAGAT CATCATCGCG 
CGCAACGAAT ACCTCGTTGT CTATCAGCGC GAGATGATGA ACCTTGATCG GGGCGACGCT 
CAGCGCATCC TGCGCCTGCG TCATGAATTC GACCTGCGCA TCGGCAAGAT GATCGAGGAT 
TGCGTGCGTG ACGGGTACAT CACCGTGCCC GATGCGCCGG CAATGTCGAT CTGGATCGGC 
GGGCTGCTCA GCTGGATAAC CTATTGCTAC CGCCCGGGCA GCAGTCGGTC TGGCGAAGCG 
GTTGCGGATC AGGCGATGAA GGCCTGTCTG CGACTGATCG GCCTCGACTG A
 
Protein sequence
MTKSSTAAKP RQRAAGAPTG REIKPGVVAF KRARILEEAA ALFFEKGYEA ATLEMLADRL 
SATKPFLYTY FRGKAAILCA ICELGVTESL AALDRIAETE RTSIDLLKAS LREVAEIIIA 
RNEYLVVYQR EMMNLDRGDA QRILRLRHEF DLRIGKMIED CVRDGYITVP DAPAMSIWIG 
GLLSWITYCY RPGSSRSGEA VADQAMKACL RLIGLD