Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2416 |
Symbol | |
ID | 3916735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 2590210 |
End bp | 2590950 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640445171 |
Product | GntR family transcriptional regulator |
Protein accession | YP_497686 |
Protein GI | 87200429 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.47741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTCAT TTGTTGAACG GGTTGGTCTT CTCCGCCAGG ATGTCAGGAC GCCCCTGTAC CTGCAACTTC AGCAGCTCGT CCGCCAGGCG ATCGAGAACC GCGTTCTCAC GCAGGACGAC ATGATTCCGG CCGAGCGCGA CCTTGCGGTC GAATACGGCG TCTCGCGCAT CACCGTGCGC AAGGCGATTG ACGGGCTGGC GCAGGAGGGG CTGGTCGTGC GCCGTCGCGG TTCGGGCACG TTCGTCGCCA CCCGCGTGGA AAAGAGCTTC TCCAAGCTGT CGTCCTTCTC GGAAGACATG ATCGCCCGGG GCCGCAGGCC CAGCAGCGAA TGGCTTTCCA AGTCTCGCGG CCTTGTCACG CCCGAGGAAT CGCTCTCGCT CGGCCTGTCG CCGGGGGCCG AGGTCTTCCG CTTCCAGCGC CTCCGCTTTG CCGACGAGGT GCCGATGGCG ATCGAGTATT CGACCATCGC CGCCCATTGC CTGCCGGGCA TCGATGCGGT CGGGGATTCG CTCTACGCCG CGCTCGAGGC TGTCGGCAAT CGTCCTGTCC GCGCGCTGCA GCGCCTGCGC GCGATGCACT TTCCCGCCGA ACAGGCCAAG CGTCTCGGCG TCGACGTCGA CCATGCCGGC CTGTTCATCG AACGTCGCGG TTTCCTCGCT GATGGCGAGG CCGTGGAGTT TACCCAATCG TACTATCGCG GCGACGCTTA CGACCTCGTC GCAGAGTTGA ACGCCAGCTA G
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Protein sequence | MASFVERVGL LRQDVRTPLY LQLQQLVRQA IENRVLTQDD MIPAERDLAV EYGVSRITVR KAIDGLAQEG LVVRRRGSGT FVATRVEKSF SKLSSFSEDM IARGRRPSSE WLSKSRGLVT PEESLSLGLS PGAEVFRFQR LRFADEVPMA IEYSTIAAHC LPGIDAVGDS LYAALEAVGN RPVRALQRLR AMHFPAEQAK RLGVDVDHAG LFIERRGFLA DGEAVEFTQS YYRGDAYDLV AELNAS
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