| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2267 |
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| Symbol | |
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| ID | 3916583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 2406158 |
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| End bp | 2407828 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640445021 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_497538 |
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| Protein GI | 87200281 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATGC TGAAGAACCC CTCGGCCAAG TACCGTCCCT TCCCGCAGAT CGACCTGCCC
GATCGCCAGT GGCCCAGCCG CACGATCACC AAGGCCCCGC GCTGGCTCTC GACCGACATG
CGCGACGGCA ACCAGTCGCT GATCGATCCG ATGGATGCCG AAAAGAAGAG CCGTTTCTTC
GATCTGCTGC TCAAGGTGGG CATCAAGGAA ATCGAGGTCG GCTTCCCCTC TGCCGGCGCG
ACCGAGTACG ATTTCATCCG CGGGCTGGTC GATTCCGGCC GCATTCCCGA TGACGTCTTC
GTCCAGGTCC TCACGCAGTC CCGCGAGGAC CTGATCAAGA CGTCGTTCGA AAGCCTCGCC
GGCGCGAAGC AGGCCATCGT CCACGTCTAC AACGCGGTTT CGCCGCTGTG GCGCCAGGTC
GTGTTCGGCA TGGAAAAGTC GGACGTGAAG GACATCGCCA TCGCCGGTGC CAAGCACCTG
CGCGATCAGG CCGCTCGCTT CCCGCAGACC GACTGGCACT TCGAATACAG CCCGGAGACG
TTCTCCACTG CCGAACTCGA TTTCAGCATT GAATGCTGCG AGGCGGTCAT GGAAATTCTC
CAGCCGACGG TCGAAAAGCC GATCATCCTC AACCTGCCCG CAACGGTCGA GGCGGCGACG
GCCAACATCT ATGCGGACCA GATCGAATAC TTCTGCCGCA ATCTGCCGGG CCGCGACCGC
GCGGTGATCT CGCTGCACAC CCACAACGAC CGCGGCACCG GCGTCGCCGC CGCCGAGCTC
GGCCTGATGG CGGGCGCGGA CCGCGTCGAG GGTTGCCTGT TCGGCAATGG CGAACGCACG
GGCAATTGCT GCCTCGTTAC CGTCGGCCTC AACATGTACA CGCAAGGGGT CGATCCGGAG
CTTGACTTCT CGGACATCGA CGAAGTGATC CAGACGGTTG AATACTGCAA CCAGCTCCCC
GTCCATCCGC GCCATCCCTA TGGCGGCGAA CTGGTCTTCA CCGCGTTTTC CGGCAGCCAC
CAGGACGCCA TCAAGAAGGG CTTCGCCGCG CAGGAAAAGC GCAATGACGA ACTCTGGTCG
GTGCCCTACC TGCCGATCGA CCCGGCCGAT CTCGGCCGCA GCTACGAAGC TGTGATCCGC
GTCAATTCGC AATCCGGCAA GGGCGGCTTT GCCTGGGTCC TGGAACAGGA CCAGGGCCTC
AAGCTGCCCA AGAAGATGCA GGCGCACTTC TCGCGCCACG TGCAGGAACT GGCCGACGAA
CTGGGCCGCG AACTGCAGGC GGCAGATATC TGGGGCGTCT TCCGCAAGGC CTATCGCCTC
GACGCGCCGC AGCATCTGCA ACTGATCGAC TACGAAGAAA CGCGCGGTGC CGACGGGACG
CGCATCTTCG CTGGCAAGAT CGAGGTCGAT GGCAAGGTCC AGTCCGTGTC CGGTCGTGGC
AATGGCCTGA TTTCCTCGGT CGTGGCCACG CTGCGCGACG GCTTCGGCGT CGAGATCGAC
ATAACCGACT ATTCCGAACA TGCGATGGGC GCCGGCAGCA ACGCTCGCGC GGCCGCCTAC
GTCGAATGCA GGACCGCAGA TGGCCGCACC ATCTGGGGCG TGGGGATCGA TGAAGACGTC
GCCACGGCCA GCGTCCGCGC CGTGCTCAGC GCGGCCAACG CGGTCGGGTG A
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| Protein sequence | MTMLKNPSAK YRPFPQIDLP DRQWPSRTIT KAPRWLSTDM RDGNQSLIDP MDAEKKSRFF
DLLLKVGIKE IEVGFPSAGA TEYDFIRGLV DSGRIPDDVF VQVLTQSRED LIKTSFESLA
GAKQAIVHVY NAVSPLWRQV VFGMEKSDVK DIAIAGAKHL RDQAARFPQT DWHFEYSPET
FSTAELDFSI ECCEAVMEIL QPTVEKPIIL NLPATVEAAT ANIYADQIEY FCRNLPGRDR
AVISLHTHND RGTGVAAAEL GLMAGADRVE GCLFGNGERT GNCCLVTVGL NMYTQGVDPE
LDFSDIDEVI QTVEYCNQLP VHPRHPYGGE LVFTAFSGSH QDAIKKGFAA QEKRNDELWS
VPYLPIDPAD LGRSYEAVIR VNSQSGKGGF AWVLEQDQGL KLPKKMQAHF SRHVQELADE
LGRELQAADI WGVFRKAYRL DAPQHLQLID YEETRGADGT RIFAGKIEVD GKVQSVSGRG
NGLISSVVAT LRDGFGVEID ITDYSEHAMG AGSNARAAAY VECRTADGRT IWGVGIDEDV
ATASVRAVLS AANAVG
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