Gene Saro_2242 details

Gene Information

• Locus tag: Saro_2242
• Symbol: nrdR
• ID: 3916558
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 2384388
• End bp: 2384867
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640444996
• Product: transcriptional regulator NrdR
• Protein accession: YP_497513
• Protein GI: 87200256
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.279557
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTGCC CATTCTGCGC CCATGACAAC AGCCAGGTAA AGGACAGCCG GCCGAGCGAG 
GACAACACCT CGATCCGCCG GCGCCGCCAG TGCGAGGGTT GCGGGGCACG CTTCACCACC 
TTCGAGCGCG TCCAACTGCG CGAAGTCGTG GTGGTGAAGA GCGGTGAGCG CCGGGAACCG 
TTCGACCGCT CCAAGATCGA GCAGTCGGTC GCGCTTGCCT GTCGCAAGCG TCCGGTCAAC 
CAGGAGCGGC TGGACCAGCT CGTTTCCGGC ATCCAGCGCC AGATCGAAAC GATGGGCGAC 
GCGGAAGTGG CGTCGAAGGT CATCGGCGAA ATGGTGATGG AAGGTCTGCG CCAGCTCGAT 
AGCGTGGCCT ATATCCGCTT CGCCAGCGTC TATCGCGACT TCACAGAAGC ACGCGACTTT 
GAGGAGTTCG CCAGCAGCGT GCAGGAAATG AGCGTGCACG AGGTTTCAGG CGGTGAATGA 

 

Protein sequence

MRCPFCAHDN SQVKDSRPSE DNTSIRRRRQ CEGCGARFTT FERVQLREVV VVKSGERREP 
FDRSKIEQSV ALACRKRPVN QERLDQLVSG IQRQIETMGD AEVASKVIGE MVMEGLRQLD 
SVAYIRFASV YRDFTEARDF EEFASSVQEM SVHEVSGGE