Gene Saro_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2239 
Symbol 
ID3916555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2382411 
End bp2382848 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content64% 
IMG OID640444993 
Productribose-5-phosphate isomerase 
Protein accessionYP_497510 
Protein GI87200253 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATCG CCATCGCTTC CGATCACGCC GCCGTCGACC TCAAGTCGAC ACTGCGCGAA 
TACCTGATCG ATCTCGGCCA CGAAGTTGCC GACCTCGGGC CGGAAACCGC CGACCGCGTC
GACTACCCCG ATTATGGCTA CAAGCTTGCT TCGGTCGTGG CCGAGGGTAT CGCCGACTTC
GGTGTCGCGC TTTGCGGATC GGGCATCGGC ATCTCGATCG CGGTGAACCG CAACCCGGCC
TGCCGCTGCG CACTGGTATC CGAACCGCTT TCGGCGGCGC TTGCCCGCGA ACACAACGAT
GCGAACGTCA TCGCGATGGG CGCGCGGCTT ACCGGCGAGG ACATGGCGAA GGCCTGCCTC
GACGCTTTCC TTTCCACCGA ATTCGGCGGA GGCCGCCATG CGGGCCGCGT CGAAAAGCTT
TCCAATCCCG CGATCTGA
 
Protein sequence
MRIAIASDHA AVDLKSTLRE YLIDLGHEVA DLGPETADRV DYPDYGYKLA SVVAEGIADF 
GVALCGSGIG ISIAVNRNPA CRCALVSEPL SAALAREHND ANVIAMGARL TGEDMAKACL
DAFLSTEFGG GRHAGRVEKL SNPAI