Gene Saro_2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2093 
Symbol 
ID3917741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2228948 
End bp2230129 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content63% 
IMG OID640444846 
Producthypothetical protein 
Protein accessionYP_497366 
Protein GI87200109 
COG category[S] Function unknown 
COG ID[COG3825] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0341328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTTCA ACTTCGTCGA CGAACTGCGC GCCGCCGGCA TCCCGGCCAG CTTCAAGGAG 
CACCTCGTGC TTCTCGAGGC GCTGGAAAAG GACGTGATCG AGCAGACGCC CGAAGCGTTC
TACTACCTCT CGCGCGCCAC CTTCGTGAAG GACGAGGGCC TGCTGGATCG CTTCGACCAG
GTCTTCAACA AGGTCTTCAA GGGCCTGCTG ACCGACTATG GCCAGCGCCC CGTCGACATT
CCCGAGGACT GGCTCAAGGC CGTCGCCGAG AAATTCCTCT CGGAAGAGGA AATGGAGAAG
ATCAAGTCCC TCGGTTCGTG GGACGAGATC ATGGAGACGC TCAAGAAGCG GCTGGAAGAA
CAGGAAAAGC GCCACCAGGG CGGCAACAAG TGGATCGGCA CCGGCGGCAC CAGCCCGTTC
GGCAATTCGG GCTACAATCC CGAAGGCGTG CGCATCGGCG GCGAAAGCAG GCACAAGCGC
GCGGTAAAAG TCTGGGAAAA GCGCGAATTC GCCAATCTCG ACAACACCCG GGAACTCGGC
ACCCGCAACA TCAAGGTCGC CTTGCGTCGC CTGCGCCGCT TCGCCCGCGA AGGCGCGGCC
GACGAACTCG ACCTCGAAGG CACGATCGAG GGCACCGCGC GCCAGGGCTG GCTCGATATC
CGCATGCGCC CGGAAAAGCG CAATGCGGTC AAGCTCCTGC TGTTCCTCGA CGTCGGCGGA
TCGATGGACC CGTTCATCAA GCTGGTCGAG GAACTGTTCA GCGCGGCCAC GGCCGAATTC
AAGAACATGG AGTTCTTCTA CTTCCACAAC TGCCTCTACG AGGGCGTGTG GAAGGACAAC
AAGCGCCGCT GGTCGGACCG CACCAGGACC TGGGACATCC TCCACAAGTT CGGCCACGAC
TACAAGGTCG TGTTCGTCGG CGACGCGGCG ATGAGCCCCT ACGAGATCAG CCACCCCGGC
GGCAGCGTCG AACACTTCAA CGAGGAAGCG GGCGCGGTGT GGATGCACCG CGTGGCGCAG
ACCTACCCCG CCACCGTCTG GCTCAATCCC GTGCCCGAAA AGCAGTGGGC CTATTCGCAG
TCGACCAAGA TGATCAAGGA CCTGATCGGC GGCAGCATGT ACCCGCTCAC CCTCGAGGGT
CTCGACGGCG CCATGCGCGA GCTGACCCGC AAGAAGCACT GA
 
Protein sequence
MFFNFVDELR AAGIPASFKE HLVLLEALEK DVIEQTPEAF YYLSRATFVK DEGLLDRFDQ 
VFNKVFKGLL TDYGQRPVDI PEDWLKAVAE KFLSEEEMEK IKSLGSWDEI METLKKRLEE
QEKRHQGGNK WIGTGGTSPF GNSGYNPEGV RIGGESRHKR AVKVWEKREF ANLDNTRELG
TRNIKVALRR LRRFAREGAA DELDLEGTIE GTARQGWLDI RMRPEKRNAV KLLLFLDVGG
SMDPFIKLVE ELFSAATAEF KNMEFFYFHN CLYEGVWKDN KRRWSDRTRT WDILHKFGHD
YKVVFVGDAA MSPYEISHPG GSVEHFNEEA GAVWMHRVAQ TYPATVWLNP VPEKQWAYSQ
STKMIKDLIG GSMYPLTLEG LDGAMRELTR KKH