| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2079 |
|---|
| Symbol | |
|---|
| ID | 3917727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 2217156 |
|---|
| End bp | 2218502 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640444832 |
|---|
| Product | biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha |
|---|
| Protein accession | YP_497352 |
|---|
| Protein GI | 87200095 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.252313 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCA AGCGCCTGCT GATCGCCAAT CGCGGCGAGA TCGCGCTGCG CATCCATCGC
GCGGCTCACG AAATGGGCAT CGAGACGGTC GCGGTGCACT CCACCGCCGA TGCCGATGCG
ATGCACGTGC GCCTTGCCGA CCATGCGGTC TGCATCGGCC CGCCCGCCGC GAAGGACAGC
TATCTCAACG TCGCCGCGAT CATCTCGGCT GCCGAGATCA CCCATGCCGA CGCGATCCAT
CCGGGCTACG GCTTCCTTTC GGAAAACGCC AAGTTCGCGG AAATCGTCGA AGCGCACGGT
ATCACCTGGG TCGGTCCCAA GCCAGAACAC ATCCGCACGA TGGGCGACAA GGTCGAGGCC
AAGCGCACCG CGGGCGCGCT CGGCCTGCCG CTGGTCCCCG GTTCCGACGG CGCGGTGTCC
GAAATCGACG AGGCCAAGAA GATCGCCGAT GCCATCGGCT ATCCGGTGAT CATCAAGGCA
GCCTCGGGCG GCGGCGGTCG CGGCATGAAG GTTTGCAACA GCGCCGACCA GCTCGAAACG
CTGATGCAGC AAGCCGGCAG CGAGGCGAAG GCCGCGTTCG GCGATGCCAC CGTCTATATC
GAGAAGTATC TCGGCAACCC GCGCCACATC GAATTCCAGA TCTTCGGTGA CGGCAACGGC
AACGCGATCC ACCTGGGCGA GCGCGACTGC TCGCTCCAGC GCCGCCACCA GAAGGTGCTC
GAGGAAGCGC CCTCGCCCGT CATCTCGGCC GACGAACGTG CGCGCATGGG CGGCATCGTC
GCCAAGGCCA TGGCCGACAT GGGGTATCGC GGCGCGGGCA CGATCGAGTT CCTGTGGGAG
AACGGCGAGT TCTACTTCAT CGAGATGAAC ACCCGCCTTC AGGTGGAACA TCCGGTGACC
GAGGCGATCA CCGGCGTCGA CCTGGTGCGC GAACAGATCC GCATTGCCGA TGGCAAGCCG
CTTTCGGTCA CGCAGGACGA GATCGAGTTC AAGGGACACG CGATCGAGTG CCGCATCAAT
GCGGAAGACC CGTTCACATT TGCCCCCTCG CCGGGACTGG TGAAGAGCTA TCACGCAGCG
GGCGGCATGC ACGTGCGCGT CGATTCAGGT CTCTACGCCG GGTACAAGAT CCCGCCGTAC
TATGACTCGA TGATTGCCAA GCTGATCGTC TACGGCCGGA CCCGCGAAGG CTGCATCATG
CGGCTGAAGC GCGCGCTCGA GGAAATGGTG ATCGAAGGCC CCAAGACCTC GATCCCGCTC
CACCAGCGCC TGCTGAGCCA GCCCGACTTC CTCAGCGGCG ACTACACGAT CAAGTGGCTC
GAGGAATGGC TGGCCAAGGA CGCCTGA
|
|---|
| Protein sequence | MAIKRLLIAN RGEIALRIHR AAHEMGIETV AVHSTADADA MHVRLADHAV CIGPPAAKDS
YLNVAAIISA AEITHADAIH PGYGFLSENA KFAEIVEAHG ITWVGPKPEH IRTMGDKVEA
KRTAGALGLP LVPGSDGAVS EIDEAKKIAD AIGYPVIIKA ASGGGGRGMK VCNSADQLET
LMQQAGSEAK AAFGDATVYI EKYLGNPRHI EFQIFGDGNG NAIHLGERDC SLQRRHQKVL
EEAPSPVISA DERARMGGIV AKAMADMGYR GAGTIEFLWE NGEFYFIEMN TRLQVEHPVT
EAITGVDLVR EQIRIADGKP LSVTQDEIEF KGHAIECRIN AEDPFTFAPS PGLVKSYHAA
GGMHVRVDSG LYAGYKIPPY YDSMIAKLIV YGRTREGCIM RLKRALEEMV IEGPKTSIPL
HQRLLSQPDF LSGDYTIKWL EEWLAKDA
|
|---|
| |