Gene Saro_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2062 
Symbol 
ID3917709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2202182 
End bp2202811 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content67% 
IMG OID640444814 
Productputative deoxyribonucleotide triphosphate pyrophosphatase 
Protein accessionYP_497335 
Protein GI87200078 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCGC CCCGTCTCGG TTCCGGAAAG CTGGTGATTG CCACGCACAA TTCCGGAAAG 
CTCAAGGAAA TCCAGGCCCT GCTCGCCCCC TATGGCATCG AATGCCTGTC GGCCGGCGCG
CTTGGCCTGC CTGAGCCTGC CGAGACGGGG ACGACATTCG TCGAGAACGC GCTGATCAAG
GCCCGCGCCG CTGCCGAAGC CTCGCAGATT CCCGCGCTTG CCGACGATTC CGGCCTTTGC
GTCGATGCCC TTGGCGGAGC ACCCGGCGTC TATACCGCCG ATTGGGCCGA GGCCGACGTC
TTCGAAGGTG GCCCGCGCCG CGACTGGTAC ATGGCCATGG GCAAGGTAGA GGGAAAGCTC
GCCGAACTCG GCCCCGAAAC CCCGCGCGAC TGCCACTTTG CCTGCGTCCT CGCGATCGCC
TGGCCAGATG GGGAAAGCGT GGTCTACGAA GGCCGCGCTC CCGGCACCCT CACATGGCCG
CCGCGCGGCA CGATGGGTTT CGGCTACGAT CCGGTCTTCG TGCCGGTGGG CGACACGCGC
ACCTTCGCTG AACTCGCCCC GGCGGAAAAG CACGCGATCA GCCACCGCGC CGATGCTTTC
GCCAAGCTGG TCGCCGACCA GTTCTCCTGA
 
Protein sequence
MSSPRLGSGK LVIATHNSGK LKEIQALLAP YGIECLSAGA LGLPEPAETG TTFVENALIK 
ARAAAEASQI PALADDSGLC VDALGGAPGV YTADWAEADV FEGGPRRDWY MAMGKVEGKL
AELGPETPRD CHFACVLAIA WPDGESVVYE GRAPGTLTWP PRGTMGFGYD PVFVPVGDTR
TFAELAPAEK HAISHRADAF AKLVADQFS