Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2025 |
Symbol | |
ID | 3917346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 2158544 |
End bp | 2159749 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640444777 |
Product | beta-lactamase |
Protein accession | YP_497298 |
Protein GI | 87200041 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.829209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGAAGC GGTGGGTTGC GCTGGCTGCG GTGGTATTGG CGGGCGGAGC GGCATTTGCT TCGCTCGACA AGGAAACGCG CGGGGTGCTG TTGGCCATGC CGACCAACGC CGACGTGCTT TCCTGGGAAC AGGGCCAGCG CGATGCGGCA TTCAGGGCGA TGGACCGCCT GCCGTTCCTG GCCAAGGCCA ACACGATCGC TCCTGCCGCC GAGCCGCTGC CGCTTCCGTC CGGCAAGCCG CTCGCCGTGC CGGGGATCGA TGCCTACATG GCCCGGCAGC GCACCGCAGG GCTGGTGATC GTGCAGGACG GCAAGGTACG GCTTGAGCGC TATGGCTTGG GCTTCGATGC CAAGGGGCGG TGGACGAGCT TTTCGGTGGC CAAGTCGTTC ACCTCGACGC TGGTCGGCGC GGCGGTGAAG GATGGCGCGA TCCGCAGCCT CGACGACAAA GTCAGCCAGT ACATTCCCGG CCTGAAGGGC AGCGCATATG ACGACGTGAG CGTGCGCCAG CTCCTTACCA TGTCATCGGG CGTGCGATGG AACGAGGACT ATGAGGACCC TAGGTCGGAC GTCGCCGAGT TCAACCGCGC CAAGCCCGAA GACGGGCTGG ATGCGACGGT GAGCTATATG CGCAAGTTGC CCCGTGCGCA TCCGCCGGGA GAGGTCTGGC ACTACAACAC GGGCGAAACC AACCTGATCG GCGTGCTGGT TACTTCGGCG ACGGGCAAGT CGCTGGCGGC CTATCTGCGG GAGAAGGTGT GGCAGCCGGC GGGCATGGAG GCCGAGGCAA CCTGGTTGCT GGGCAAGACC GGCCACGAGA TCGGCGGATG TTGCCTGCAG GCGGCGACGC GCGACTATGC GCGCTTCGGG CTGCTCGTGC TGGCGAACGG CAAGGGCCGG GACGGACGGC AGGTGGTGCC GGAGGACTGG TTCGGTCAGG CGACGACGAA GCAAAAGGAC ATCGGCAAGC CGGGACGCGG CTATGGGTTC CAGTGGTGGA CCAACGATGA CGGCACCTTT GCCGCGCAGG GCATTTTCGG CCAGGGCATC TTTATCGACC CGAAGCGCAA GCTGGTGATC GCGAGCAATT CCGATTGGCC GCGCGCCAGC GCAGGGCCGC AACCCGAGGA GCGCGAGGCG TTCTACCGGC AGGTCCAGCG ACTGCTCGAC GCGGAGCAGG GGGCCGGACC GGTGCGCCTG AACTAA
|
Protein sequence | MRKRWVALAA VVLAGGAAFA SLDKETRGVL LAMPTNADVL SWEQGQRDAA FRAMDRLPFL AKANTIAPAA EPLPLPSGKP LAVPGIDAYM ARQRTAGLVI VQDGKVRLER YGLGFDAKGR WTSFSVAKSF TSTLVGAAVK DGAIRSLDDK VSQYIPGLKG SAYDDVSVRQ LLTMSSGVRW NEDYEDPRSD VAEFNRAKPE DGLDATVSYM RKLPRAHPPG EVWHYNTGET NLIGVLVTSA TGKSLAAYLR EKVWQPAGME AEATWLLGKT GHEIGGCCLQ AATRDYARFG LLVLANGKGR DGRQVVPEDW FGQATTKQKD IGKPGRGYGF QWWTNDDGTF AAQGIFGQGI FIDPKRKLVI ASNSDWPRAS AGPQPEEREA FYRQVQRLLD AEQGAGPVRL N
|
| |