Gene Saro_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2025 
Symbol 
ID3917346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2158544 
End bp2159749 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content67% 
IMG OID640444777 
Productbeta-lactamase 
Protein accessionYP_497298 
Protein GI87200041 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.829209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAAGC GGTGGGTTGC GCTGGCTGCG GTGGTATTGG CGGGCGGAGC GGCATTTGCT 
TCGCTCGACA AGGAAACGCG CGGGGTGCTG TTGGCCATGC CGACCAACGC CGACGTGCTT
TCCTGGGAAC AGGGCCAGCG CGATGCGGCA TTCAGGGCGA TGGACCGCCT GCCGTTCCTG
GCCAAGGCCA ACACGATCGC TCCTGCCGCC GAGCCGCTGC CGCTTCCGTC CGGCAAGCCG
CTCGCCGTGC CGGGGATCGA TGCCTACATG GCCCGGCAGC GCACCGCAGG GCTGGTGATC
GTGCAGGACG GCAAGGTACG GCTTGAGCGC TATGGCTTGG GCTTCGATGC CAAGGGGCGG
TGGACGAGCT TTTCGGTGGC CAAGTCGTTC ACCTCGACGC TGGTCGGCGC GGCGGTGAAG
GATGGCGCGA TCCGCAGCCT CGACGACAAA GTCAGCCAGT ACATTCCCGG CCTGAAGGGC
AGCGCATATG ACGACGTGAG CGTGCGCCAG CTCCTTACCA TGTCATCGGG CGTGCGATGG
AACGAGGACT ATGAGGACCC TAGGTCGGAC GTCGCCGAGT TCAACCGCGC CAAGCCCGAA
GACGGGCTGG ATGCGACGGT GAGCTATATG CGCAAGTTGC CCCGTGCGCA TCCGCCGGGA
GAGGTCTGGC ACTACAACAC GGGCGAAACC AACCTGATCG GCGTGCTGGT TACTTCGGCG
ACGGGCAAGT CGCTGGCGGC CTATCTGCGG GAGAAGGTGT GGCAGCCGGC GGGCATGGAG
GCCGAGGCAA CCTGGTTGCT GGGCAAGACC GGCCACGAGA TCGGCGGATG TTGCCTGCAG
GCGGCGACGC GCGACTATGC GCGCTTCGGG CTGCTCGTGC TGGCGAACGG CAAGGGCCGG
GACGGACGGC AGGTGGTGCC GGAGGACTGG TTCGGTCAGG CGACGACGAA GCAAAAGGAC
ATCGGCAAGC CGGGACGCGG CTATGGGTTC CAGTGGTGGA CCAACGATGA CGGCACCTTT
GCCGCGCAGG GCATTTTCGG CCAGGGCATC TTTATCGACC CGAAGCGCAA GCTGGTGATC
GCGAGCAATT CCGATTGGCC GCGCGCCAGC GCAGGGCCGC AACCCGAGGA GCGCGAGGCG
TTCTACCGGC AGGTCCAGCG ACTGCTCGAC GCGGAGCAGG GGGCCGGACC GGTGCGCCTG
AACTAA
 
Protein sequence
MRKRWVALAA VVLAGGAAFA SLDKETRGVL LAMPTNADVL SWEQGQRDAA FRAMDRLPFL 
AKANTIAPAA EPLPLPSGKP LAVPGIDAYM ARQRTAGLVI VQDGKVRLER YGLGFDAKGR
WTSFSVAKSF TSTLVGAAVK DGAIRSLDDK VSQYIPGLKG SAYDDVSVRQ LLTMSSGVRW
NEDYEDPRSD VAEFNRAKPE DGLDATVSYM RKLPRAHPPG EVWHYNTGET NLIGVLVTSA
TGKSLAAYLR EKVWQPAGME AEATWLLGKT GHEIGGCCLQ AATRDYARFG LLVLANGKGR
DGRQVVPEDW FGQATTKQKD IGKPGRGYGF QWWTNDDGTF AAQGIFGQGI FIDPKRKLVI
ASNSDWPRAS AGPQPEEREA FYRQVQRLLD AEQGAGPVRL N