Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2016 |
Symbol | |
ID | 3917337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 2148509 |
End bp | 2149198 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640444768 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_497289 |
Protein GI | 87200032 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0776172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGCGG CGAGGCTGGC ACAGGCACTG ACGGCACAGA GCCTGTTCGC GGATTGCGAG CAGGCCGAGC TTTCGGACAT CATCGGGCGC GGTCAGGTCC GAACCTTCAA GCCCGGCCAG GAACTCATGG CGCAGGGCGA GGAGGGCAAG ACGCTCTTCA TCGTGCTGAG CGGCCTTGCG CGCGTCAGCA TGGTGGCCGC CAATGGTCGC GAAATCATCC TCGACTATGC CGAGGCGGGC CATGTCCTGG GCGAGATCGC GTTTCTCGAC GGCGGGGAAC GGACGGCCTC GGTCGAGGCG ATCGAGCCGG TCGAGGCGCT GGTGCTGACG CGCAGCGCCT TTGCCGAGAT CATCGACCGT CACAAGGGCC TGTCGCTGCG CCTGCTGAAG GCGATGGCGC GGCGACTTCG CCAGAACAAC GCGGTGATCG AAGCCGACAG GGCCTATACG TCCGGGCCGA GGCTTGCGCG GTTCCTGCTG CGCCTGATGA TGGGCGAGGG TTCGGATGCC GGGGCGCAGC TCAAGATCGC GCTGAGCCAG GGCGAACTGG GCAACTTCGC CGGCATGTCG CGAGAGCAGA TCAACCGGCA GCTTTCCGCC TGGGCCGAGA ACGGCATCGT TGCGCTGAAG GGGGGCAGGG TGACGATCCT CGACCGCGAG GCGCTGGTCG ATGTCGCGGA GGCCTGGTAG
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Protein sequence | MDAARLAQAL TAQSLFADCE QAELSDIIGR GQVRTFKPGQ ELMAQGEEGK TLFIVLSGLA RVSMVAANGR EIILDYAEAG HVLGEIAFLD GGERTASVEA IEPVEALVLT RSAFAEIIDR HKGLSLRLLK AMARRLRQNN AVIEADRAYT SGPRLARFLL RLMMGEGSDA GAQLKIALSQ GELGNFAGMS REQINRQLSA WAENGIVALK GGRVTILDRE ALVDVAEAW
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