Gene Saro_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2016 
Symbol 
ID3917337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2148509 
End bp2149198 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content67% 
IMG OID640444768 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_497289 
Protein GI87200032 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0776172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCGG CGAGGCTGGC ACAGGCACTG ACGGCACAGA GCCTGTTCGC GGATTGCGAG 
CAGGCCGAGC TTTCGGACAT CATCGGGCGC GGTCAGGTCC GAACCTTCAA GCCCGGCCAG
GAACTCATGG CGCAGGGCGA GGAGGGCAAG ACGCTCTTCA TCGTGCTGAG CGGCCTTGCG
CGCGTCAGCA TGGTGGCCGC CAATGGTCGC GAAATCATCC TCGACTATGC CGAGGCGGGC
CATGTCCTGG GCGAGATCGC GTTTCTCGAC GGCGGGGAAC GGACGGCCTC GGTCGAGGCG
ATCGAGCCGG TCGAGGCGCT GGTGCTGACG CGCAGCGCCT TTGCCGAGAT CATCGACCGT
CACAAGGGCC TGTCGCTGCG CCTGCTGAAG GCGATGGCGC GGCGACTTCG CCAGAACAAC
GCGGTGATCG AAGCCGACAG GGCCTATACG TCCGGGCCGA GGCTTGCGCG GTTCCTGCTG
CGCCTGATGA TGGGCGAGGG TTCGGATGCC GGGGCGCAGC TCAAGATCGC GCTGAGCCAG
GGCGAACTGG GCAACTTCGC CGGCATGTCG CGAGAGCAGA TCAACCGGCA GCTTTCCGCC
TGGGCCGAGA ACGGCATCGT TGCGCTGAAG GGGGGCAGGG TGACGATCCT CGACCGCGAG
GCGCTGGTCG ATGTCGCGGA GGCCTGGTAG
 
Protein sequence
MDAARLAQAL TAQSLFADCE QAELSDIIGR GQVRTFKPGQ ELMAQGEEGK TLFIVLSGLA 
RVSMVAANGR EIILDYAEAG HVLGEIAFLD GGERTASVEA IEPVEALVLT RSAFAEIIDR
HKGLSLRLLK AMARRLRQNN AVIEADRAYT SGPRLARFLL RLMMGEGSDA GAQLKIALSQ
GELGNFAGMS REQINRQLSA WAENGIVALK GGRVTILDRE ALVDVAEAW