Gene Saro_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1951 
Symbol 
ID3917266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2069644 
End bp2070213 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content60% 
IMG OID640444698 
Productpolyhydroxyalkanoate synthesis repressor PhaR 
Protein accessionYP_497225 
Protein GI87199968 
COG category[S] Function unknown 
COG ID[COG5394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGGCGC ACGTCATGGC AAATGAAGGC AAGTCCGGCG GAACGGTGAT CATCAAGAAA 
TACGCCAATC GCCGTCTCTA TAATACCAGT ACGTCCAGCT ACATCACGCT CGATCACCTC
GCGCAAATGG TAAAGGACAA CGTTGACTTC CAGGTAATCG ACGCCAAGAC CGGCGCCGAC
CTTACCCATG CGATCCTCAC CCAGATCATC ATGGAAGAGG AAGCGGCGGG CGAGCAGATG
CTCCCCACGA ACTTCCTGCG CCAGCTCATC TCGATGTACG GCAATTCGAT GCAGGCCCTC
CTGCCCGGCT ACCTCGAAGC CTCGATGGAT CATTTCCGCG AGAATCAGGT CAAGCTGCGC
AAGGCGATTG AGGACAGCAT TGGCGCCAAC CCGCTTGCCC AGTTGGCACA GCGCAACATG
GAAATGTTCA AGGCCGCCGC TGCAGCCTTC GTGCCCGGTG CCGTCCAGCG CGACGACGCC
AAGCCCGAAC CGGCGGAGGC CGACGATCTC GACGTCCTGC GCAAGCAGAT GGCCGAGATG
CAGAAGAAGC TCGACCAGCT CTCGAAGTGA
 
Protein sequence
MGAHVMANEG KSGGTVIIKK YANRRLYNTS TSSYITLDHL AQMVKDNVDF QVIDAKTGAD 
LTHAILTQII MEEEAAGEQM LPTNFLRQLI SMYGNSMQAL LPGYLEASMD HFRENQVKLR
KAIEDSIGAN PLAQLAQRNM EMFKAAAAAF VPGAVQRDDA KPEPAEADDL DVLRKQMAEM
QKKLDQLSK