| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1912 |
|---|
| Symbol | |
|---|
| ID | 3917135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 2023985 |
|---|
| End bp | 2025292 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640444658 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_497186 |
|---|
| Protein GI | 87199929 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4961] Flp pilus assembly protein TadG |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0782839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCAT CAATTCGATC CTTGCCCAAG TCGATCAGCC TTTTCCGGCG CCTGCTGCGC
GCGCGCGCAG GCAACGCGAC GTTGCTGATG GCGTTCGGTG CACCAGCGCT CATCGCGACT
GCCGGTTTCG CGGTCGATAC CGCGCAATGG TATCTTTGGA AGCGGGAAAT GCAGTACGCT
GCCGACCAGG CCGCCCTGTC CGCGGCGTAT TCCAAGTCCA AGGGCATCAG CACCACCGCG
TACGAGACTC ACGCTGTCCA GGAATATAAC GCAAACCTGC AGCTCGTCAC CTTCAGCGAT
ACGCCGACGG TTTCGCTTGC GGCCTACAAT GGCGGCACAA ACAACAGTGT TGTCGTCAGG
GCTTCTGCCA CGAGAGAGCT GGCCTTCAGC GGGATTGTTT TGGGAAAGCC GACAACCGTC
TCGGTGTCCG CCCAGGCGAC GTATACGGCC GGCGCCACCT ACACGAGCTG CATCATTGCG
ACAAACGCGA CGGCCGACGG CGCGATAACG ATCGGCGGCA GTTCGATCCT CAAGTCCGGC
TGCGGCATTG CCGCGCTTTC CAACTCGACC AACGCGATCA AGGTCGATGG TAGCCCGACG
ATCGACGTGA ACTACGTTCT GGCCGCAGGC GGCATCGACG ACTGGTTCAA CACCAATACC
GATGACGTCG TGAAGGAATA CGTGACCTCG CTGGCCGACC CGTTCGCCTC GCTGACACCG
CCGACCAACA ACACTGCTGC AACGCCATAT CGCTGCGTAA GGTCGGGCGG TGTGACCCAG
GCCACCCTCA ATCCGGGCAC CTACACCGAC ATCACCACCT CCTGCAACAC GGTGATGAAC
AGCGGAATCT ACGTGATAAA TGGCGGCTCG TTCACCATCC GCGCTCAGGA TGCGGTCACT
GCCAATGGCG TGATGATCGT GCTGAAGAAC GGTGCCTCAA TCAAGATCAA TGGCGGTGCG
GCGCTCAACC TTACGGCAAT GACCTCGTCA CAGCTTACTA GTGCCGGCGT GAGCGCGACC
GATGCCCAAA AGCTTGAAGG CATTCTCTTC TTCGAGGATC GCAATAGCAG CGGCAACACG
TCCATCCTGA ACGGAAATTC GTCCTCGACC ATCAACGGCA CCGTCTATCT GCCTAAAAGC
CTGATCAAGT TCGGCGGGAC TGCAAAGACG ACCAGCCGCT GCCTGCAGAT CACCGCGAAC
ATGGTCGCGG TCCAGGGCAA CACCGTTATG ACGAATTTCT GCCCCGCTGG CCTCACCACC
GACACTGTCG TGAGTTCCGA GGGGCCAAAG GTCATCCTTG TGTCATGA
|
|---|
| Protein sequence | MRPSIRSLPK SISLFRRLLR ARAGNATLLM AFGAPALIAT AGFAVDTAQW YLWKREMQYA
ADQAALSAAY SKSKGISTTA YETHAVQEYN ANLQLVTFSD TPTVSLAAYN GGTNNSVVVR
ASATRELAFS GIVLGKPTTV SVSAQATYTA GATYTSCIIA TNATADGAIT IGGSSILKSG
CGIAALSNST NAIKVDGSPT IDVNYVLAAG GIDDWFNTNT DDVVKEYVTS LADPFASLTP
PTNNTAATPY RCVRSGGVTQ ATLNPGTYTD ITTSCNTVMN SGIYVINGGS FTIRAQDAVT
ANGVMIVLKN GASIKINGGA ALNLTAMTSS QLTSAGVSAT DAQKLEGILF FEDRNSSGNT
SILNGNSSST INGTVYLPKS LIKFGGTAKT TSRCLQITAN MVAVQGNTVM TNFCPAGLTT
DTVVSSEGPK VILVS
|
|---|
| |