Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1886 |
Symbol | |
ID | 3917107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 1992136 |
End bp | 1993641 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640444630 |
Product | major facilitator transporter |
Protein accession | YP_497160 |
Protein GI | 87199903 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.156331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGAGCAT CACTGAACGC AATGCCCCGG CAGAAGCCAC GCCAGGATTT CCGGGGCCTG TGGAACATCA GCTTCGGCTA CTTCGGCATC CAGCTCGCCT TCGCGCTGCA AAACGCCAAC GTCAGCCGCA TCTTCCAGTC GCTCGGCAGC GCGGTCGACG ATCTTGCGTT CCTGTGGATC GCCGGGCCCG TTACCGGCCT GATCGTGCAG CCGCTGATCG GCTACTACTC CGACCGCACC TGGGGACGCC TCGGGCGCCG CCGCCCCTAT TTCCTGGCCG GTGCCGTGCT TGCGGGGCTT GCGCTAGTCG GCCTGCCCAA CACCGGCTTG CTCCTCCTCG CTGCGGCGTT CCTGTGGATG CTCGATGCCT CCCTCAACGT GGCGATGGAA CCCTTCCGCG CCTTCGCTGG CGACATGACG CCCGACGACC AGCGTGCGCA GGCCTTCGCC TTCCAGACCT GGTTCATCGG CGCGGGCGCG GTCGTCGGCA GCCTTGCCCC GGCCCTGTTC AACTGGCTCG GCATCGCCAA CACCGCTCCG GAAGGCATCA TTCCGCCCTC CGTGCGCTAC AGCTTCTACC TTGGCGCTGC CGCAATGGTT CTCGCGGTGG GATGGACCGT GCTGCGCGTG CGGGAATACA GCCCCGACGA AATGGCCGCT TTCGAAGCGG ATGCCACCGC CCCCATCGCT CCGGAACACG AACCTCTCGT TTACCCCCGC TCCGGTCCAG CCTGGGTTGC CGTTGGCGCG GTGCTCGTTG CGATTGTCGC CGCGCTTGGA CTGGATCGTC AGCTCTACGT CCTCGGCACG GGCCTCGCAG TGTTTGGCGC CATCCAGATC GGCGTTCGCG CCACGGCGGC CAGAGGCGCG CTTGCACACA TCGTCAGCGA CCTTGCGCAA ATGCCCGCGC AGATGAAGCA GCTGGCGCTC GCCCAGTTCT TCACCTGGAT CGGCTTCTTC ATCGTGTGGA TCTACACCAC GCCCGTCGTT ACCGAACAGG CCTTCGGCGC GACCGACGTT TCCAGCGCCG CCTACAACGA AGGCGCGGAC TGGGTCGGCG TGATGTTCGC GTTCTACAAC GGGATCGCGG CTGTCTCGGC CTTCCTGCTG CCCGTGCTGG CGCGACGCAT CGGCAATGCC AGGACGCATG CGGTCGGCCT CCTGTGCGGC GCCAGCGGCT TCCTCGGGCT GCTGCTGATC CGCGATCCGT GGTGGCTGCT GCTGCCGATG GTCGGAATGG GGATCGCGTG GGCATCTGTC CTGTCGATGC CCTACGTCAT CCTGACCCGC GTGCTGCCAG CGCGCAAGTT CGGCATCTAC ATCGGAATCT TCAATTTCTT CATCGTCATC CCCCAGCTTG TCGTGGCGAC GCTGATGGGC GGCATCATGC GCAGCTTTTT CCCGGGCGAA CCCCGCTGGA CGATGCTCGT GGCCGCGCTG ATGATGGCCG CTGCCGCAGG GGCGATGATG CTGGTGCGCG AACACAGGAG GGATAGCGCG GCATGA
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Protein sequence | MGASLNAMPR QKPRQDFRGL WNISFGYFGI QLAFALQNAN VSRIFQSLGS AVDDLAFLWI AGPVTGLIVQ PLIGYYSDRT WGRLGRRRPY FLAGAVLAGL ALVGLPNTGL LLLAAAFLWM LDASLNVAME PFRAFAGDMT PDDQRAQAFA FQTWFIGAGA VVGSLAPALF NWLGIANTAP EGIIPPSVRY SFYLGAAAMV LAVGWTVLRV REYSPDEMAA FEADATAPIA PEHEPLVYPR SGPAWVAVGA VLVAIVAALG LDRQLYVLGT GLAVFGAIQI GVRATAARGA LAHIVSDLAQ MPAQMKQLAL AQFFTWIGFF IVWIYTTPVV TEQAFGATDV SSAAYNEGAD WVGVMFAFYN GIAAVSAFLL PVLARRIGNA RTHAVGLLCG ASGFLGLLLI RDPWWLLLPM VGMGIAWASV LSMPYVILTR VLPARKFGIY IGIFNFFIVI PQLVVATLMG GIMRSFFPGE PRWTMLVAAL MMAAAAGAMM LVREHRRDSA A
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