| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1878 |
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| Symbol | |
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| ID | 3917099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1979797 |
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| End bp | 1981896 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640444622 |
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| Product | glycoside hydrolase, clan GH-D |
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| Protein accession | YP_497152 |
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| Protein GI | 87199895 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGAGG TATTCGCCTT GCACTCCGGG GACGGCAGTC TCGTCTGGGA AGCGGACGAC
GGCAGCGCGC CCGCGTGGCG GCACTTCGGC CCCCGGCTGA CAGCCGACGG GATCCGGCCG
ATCCGGGACC AGCGCGCGCC TGCGTCATAC TCGCTGGACG ACGACGTACC GTTCGCCGTC
GCACCGGCGG CCGGGCTGGG CTGGTTCGGA CCTTCGGCCA TGTGCTTGCG GCGCGGCTCA
GTCGCACTCG TGCCGGCAAT GGCGGGGGCG TCCGTCGCCG GGGATGCCGG CTCCGTGCGC
ATCATCACGC GCGATCCGGT TGCGGGCGTG GAGCTTGAAC AGGTGTTCGA AGCAGTTGGC
GGTGCTTTCG TCTGCCGCAG CGTCGTGCGC AACATCGGCA GTGAAACGTT CGAGGTCGAC
TGGCTGTCGA GCGCGCTCCT CCCCATCGCG GGTTCCGCGC GCGAGATCGT GTCGTGGCGT
GGACGCCACA ACGCCGAACT GGTCGAATGC CGCGAGCCGA TGCCGCAGCA TTCGTGGGTG
CGCGAAGGTC GGCGCGGGAT TTCCGGGCAC GGCGGCCCTC CGGGCCTGTT CGTGCTCGAC
GAAGGCGCTA CGTATCACGC GGGCACTGTC CGCGCGCTGC AGCTTGCGTG GTCTGGCGAT
GCGCGCATCG AGGTCGAGCG CGACGACGAG GGTTTCTGGA CGTTGAACGC GGGCGCGGTG
CTTCAACCTG GCGAGGCCAG CCTTGCGCCC GGCGAGAGCT GGCAGTCGCC CGACGCCATC
GTGACGGTAT CAACCTCCGG CCGGAACGGC GCGGCGCAGG CGTTTCACGA TGCAGTCCGC
GCGCGCATCC GCTGGCCGGA CGGGGCCATG CGCCCACGGC CCGTGCACCT CAACTCGTGG
GAAGCCTGCT ATTTCGACCA CGACGAGGAG CGCATCGTTG CCCTTGCGGA AGCGGCGGCA
TCCGTGGGCG TGGAGCGGTT CATTCTCGAC GATGGCTGGT TCCGGGGCCG CAACGACGAC
ACGGCGGGAC TGGGCGACTG GACAACCGAT CCCGTCAAGT ATCCGCACGG ACTGCGCACC
CTGGCAGACC GCGTCAATGC GCTGGGCATG GAGTTCGGGC TCTGGGTCGA ACCGGAAATG
ATCAATCCCG ATAGCGACCT CTATCGGGCG TATCCGGACT GGGCGCTTGC GCTTCCGGGG
CGGAAACGAC CGACTGCCCG GAACCAGCTC GTGCTTGACA TGCGGCGACG GGACGTTCGC
GACCACCTCT TCGGCTGCAT CGACGCGCTG CTGCGCGAAT TGCCGATCAC CTACCTCAAG
TGGGACCACA ACCGCGACCT CGCGCCTGCT GGCGGGGCGG CGCAGATGAG GGGGGCGTAT
GAACTGTTCG CGCGGGTCCG CGCAGCGCAT CCCGCCGTGG AGATCGAGGC CTGTGCTGGC
GGCGGCGGGC GCAACGATGC AGGTATGGCC GACTATTGCC ATCGCTACTG GACCAGCGAC
AATATCGACG CGGCCAGTCG CATCGGTATC CAGCGCGGGT TCCTGTCGTT CCTCCCTCCC
GAGGTGATGG GATCGCACAT CGCCGCAAGC CCCGCCCATG CCACGGGGCG CAGGCATTCC
CTGGGCTTCC GGGCTGCCAT GGCGATGGCC GGTCATCTCG GCGTGGAAAT GGACCCGCGC
ACGCTGGGCG ATGCAGAGCG CGCCGAACTG GCCGACTGGA TCGCCTTTCA CAAGCAATGG
CGCGGATTGC TGCACCAGGG CACTGTCTGG CTGGGCGAGG GTGCGGATGC AGCGTTCTGG
CAGGCGCAGG GGAATGCAGC GGAACTGCTG CTCTTCGTGA TCCGCGCGGA CCCGCCGCTG
GACCGTCGCC CGCAGCCTTT GCCACTGCCT TTCGCGGGCC AGGATGGAAC ATGGGACATC
CGGCTTCTTC GTATCGCCGG GGGCGAGGGC GGGCATGCCG CGCATTCCGC TGCGCTGTTC
GAGGCAATGA AGGCCGCCCC TCAGGCGTTC CCGGCTGACT GGCTCTCGGC CAACGGCCTG
CCGCTCCCGC CCTGCAAGGC GGAGACGGTC ACCATCTTCC ATCTGCGCAA ACGCGCCTGA
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| Protein sequence | MGEVFALHSG DGSLVWEADD GSAPAWRHFG PRLTADGIRP IRDQRAPASY SLDDDVPFAV
APAAGLGWFG PSAMCLRRGS VALVPAMAGA SVAGDAGSVR IITRDPVAGV ELEQVFEAVG
GAFVCRSVVR NIGSETFEVD WLSSALLPIA GSAREIVSWR GRHNAELVEC REPMPQHSWV
REGRRGISGH GGPPGLFVLD EGATYHAGTV RALQLAWSGD ARIEVERDDE GFWTLNAGAV
LQPGEASLAP GESWQSPDAI VTVSTSGRNG AAQAFHDAVR ARIRWPDGAM RPRPVHLNSW
EACYFDHDEE RIVALAEAAA SVGVERFILD DGWFRGRNDD TAGLGDWTTD PVKYPHGLRT
LADRVNALGM EFGLWVEPEM INPDSDLYRA YPDWALALPG RKRPTARNQL VLDMRRRDVR
DHLFGCIDAL LRELPITYLK WDHNRDLAPA GGAAQMRGAY ELFARVRAAH PAVEIEACAG
GGGRNDAGMA DYCHRYWTSD NIDAASRIGI QRGFLSFLPP EVMGSHIAAS PAHATGRRHS
LGFRAAMAMA GHLGVEMDPR TLGDAERAEL ADWIAFHKQW RGLLHQGTVW LGEGADAAFW
QAQGNAAELL LFVIRADPPL DRRPQPLPLP FAGQDGTWDI RLLRIAGGEG GHAAHSAALF
EAMKAAPQAF PADWLSANGL PLPPCKAETV TIFHLRKRA
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