Gene Saro_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1838 
Symbol 
ID3918398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp1937510 
End bp1938643 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content67% 
IMG OID640444580 
Productglucose sorbosone dehydrogenase 
Protein accessionYP_497112 
Protein GI87199855 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0103271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAATC CGATCCTGCG CTCGCTATCG CCTCTCGCTC TTCTCCTCGC AAGTTGCGGC 
GCTCCGATTT CGGCCCAAGG ATCGGACGAG GCGGCACAAG GCATGTCGAT CACCGACGTC 
GCGACCTTCG ACGAGCCGTG GGCAATGACC TTCCTGCCCG GAACCGACCT CGCTCTGATC 
ACCGAACGCA AGGGCAAGCT CAAGGTCTGG CGCGAGGGTG AAAGCCGGAC GGTGGAGGTC 
GCGGGCGCCC CCGTCGTGGA CTACGGCGGC CAGGGCGGGC TCGGCGACAT CGTCGCGGCG 
CCCGACTATG CAACCAGCGG TAAGGTCTAT CTAAGCTGGG CCGAGGCGGG TTCGGGCGAC 
GCCCGCGGCG CGGTCGTCGC GGTGGCAAGG CTTGTGCTGG GCGGCACGCC TCGTCTCGAA 
GGGCTGGAGG TGATCTGGCG ACAGTTCCCG AAAGTCACCG GGCGCGGGCA CTACTCTCAC 
CGCATCGCAT TCTCACCGGA CGGCAAGTAC CTTTTCGTTT CCTCGGGCGA GCGACAGAAG 
TTCACCCCCG CGCAAGACCT GACCGGCAAC CTCGGCAAGG TCGTCCGCCT CCTGCCCGAC 
GGGACGCCCG CGCCGGGCAA TCCGTTTGCG GACAAGGGCG GAGTTTCGGC GCAGATCTGG 
TCCTACGGCC ACCGCAACCT GCTCGGCCTC GTCTTCTCGC CCGACGGCCG CCTGTGGGAT 
CTCGAGCATG GACCGGCGGG CGGGGACGAG ATCAATCTGG TCGAGCCGGG GAAGAACTAC 
GGCTGGCCCC TGGTGTCGGA CGGCGATCAC TACGACGGCA AGCCGATCCC GCGCCACAAG 
ACCCGACCCG ACCTCGCCGC CCCGGCGATA AGCTGGAACC CGGTGATCGC GCCGGGGGAC 
ATGATCTTCT ACACTGGCAA GGCATTCCCG CAGTGGCAGG GGCAGGCCCT GATCGCGGGG 
CTCGGCTCGG GGGGCATCGT GCGCGTCGCT ATCGAGGGCG ACAAGGCCCG CGAAGTGGAG 
CGCATCGACC TCGGCAACCG CATCCGCGAG ATAGAGCAGG CACCCGACGG ATCGCTCTAC 
GTGTTGGAAG ACGGCGAAGG CGCGCGGCTT CGCCACCTGT CCCCAAAGAG CTAG
 
Protein sequence
MTNPILRSLS PLALLLASCG APISAQGSDE AAQGMSITDV ATFDEPWAMT FLPGTDLALI 
TERKGKLKVW REGESRTVEV AGAPVVDYGG QGGLGDIVAA PDYATSGKVY LSWAEAGSGD 
ARGAVVAVAR LVLGGTPRLE GLEVIWRQFP KVTGRGHYSH RIAFSPDGKY LFVSSGERQK 
FTPAQDLTGN LGKVVRLLPD GTPAPGNPFA DKGGVSAQIW SYGHRNLLGL VFSPDGRLWD 
LEHGPAGGDE INLVEPGKNY GWPLVSDGDH YDGKPIPRHK TRPDLAAPAI SWNPVIAPGD 
MIFYTGKAFP QWQGQALIAG LGSGGIVRVA IEGDKAREVE RIDLGNRIRE IEQAPDGSLY 
VLEDGEGARL RHLSPKS