| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1803 |
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| Symbol | |
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| ID | 3918362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1899884 |
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| End bp | 1902463 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640444544 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_497077 |
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| Protein GI | 87199820 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.120095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCTTG TCATCGTAGA ATCCCCCGCC AAGGCCAAGA CCATCGAGAA GTACCTCGGA
CCTGGCTACA AGGTGCTGGC CTCCTACGGC CACGTCCGCG ATCTCCCCGT GAAGGATGGG
TCCGTCCGCC CGGACGAGGA TTTCGCCATG GATTGGGAGC TTTACGGGGA CAAGCAGGCC
CGCGTGAAGG CGATCTCCGA TGCGGCCAAG GGCGCGGACC GACTGATCCT CGCGACCGAC
CCTGACCGCG AGGGCGAAGC CATTTCGTGG CACGTCAGGG AACTGCTGGC GAAACGACGC
GTGCTTCCGA AGGAAGTCGA ACGCGTTACT TTCAACGCCA TCACCAAGCA GACCGTGACC
GACGCGATGA AGAAGCCGCG TGCGCTCGAC CAGGACCTGA TCGACGCGTA CCTGGCTCGC
CGCGCGCTGG ACTATCTGTT TGGGTTCACG CTTTCGCCGG TCCTGTGGCG CAAGCTGCCC
GGCGCCAAGT CGGCCGGGCG CGTCCAGTCG GTCGCCCTGC GCCTCATCGT CGAGCGCGAG
CGCGAGATCG AGGCCTTCCG CGCGCAGGAA TACTGGTCCG TCATCGCCCG GCTCGAACAT
GCCGGCACCG AGTTTGCGGC GCGGCTCGTA AAGTTCGACG GGCAGAAGCT CGACAAGCTG
ACGCTGGGCG ATGAAGGCGC GGCGATGAGG GCCAAGGGCG TGGTCGAGGC CGCGACTTTC
CGCGTCGAGG AAGTCGAGAC AAAGCCCACG CGCCGCAACC CCTATCCGCC GTTCACCACA
TCGACCCTGC AACAGGAAGC CGCGCGCAAG CTCGGCTTCT CGGCCAGCCA CACCATGCGC
GTGGCGCAGA CGCTCTACGA AGCGGGCGCG ATCACCTACA TGCGTACCGA TGGCGTGCAG
ATGGACCCGA GCGCCATTTC GGCCGCGCGC AAGGCCATCT CGGATCGTTA CGACGGCCAC
TACCTGCCCG AAAAGCCCCG CCATTACGAA ACTAAGGCCA AGAACGCGCA GGAAGCCCAC
GAGGCGATCC GGCCCACGGA TTTCTCGAAG GACCGTTACG GGTCCGCCGA CGAGGCGCGG
CTCTACGATC TGATCTACAA GCGTGCGATG GCCAGCCAGA TGGCGTCGGC CAATATCGAG
CGGACGACCG TTACGTTGCG CGACGGCACC GGAAAGCACG AACTGCGCGC CACTGGCCAG
GTGGTGAAGT TCCCCGGCTT CCTCGCCGTC TATGAGGAAG GTCGCGACCA GAAGCAGGAT
GGCGACGAAG AGGATGGCAG CCTGCTTCCC GCGATGGCAT CGGGCGATAC CCCGGCCAAG
CGCGGGGTCG ATGCCACCCA GCACTTCACC CAGCCGCCGC CGCGCTATTC GGAAGCGAGC
CTCGTCAAGC GGCTCGAGGA ACTCGGCATC GGCCGTCCTT CGACCTACGC TGCAACCCTT
CAGGTGTTGA AGGACCGCAA CTACGTCAGG ACCGAGAAAA ACCGTTTCTT CGCAGAGGAA
TCCGGACGAC TTCTCACAGC ATTTCTCGAG CGATTCTTCC CTCGCTACGT GGCTTACGAG
TTCACGGCGG GCATGGAGGA GGAGCTGGAC GACGTGTCCG GTGGACGCGC CGAATGGAAG
AAGGTGCTTG CCGACTTCTG GCGCGACTTC AAGCCCAAGT CCGACGAGGT GATGGAGAAG
AAGCCGAGCG AGGTTACCGC CGAGCTTGAC GAGTTTCTCT CCGACTACCT CTTCCCCCCG
CGCGCCGATG GCACCGACCC GCGCCTCTGC CCCAAGTGCG AAGAGGGCCG TCTGTCGCTG
CGCGGCGGGC GTTACGGCGC TTTCGTGGCC TGCTCGAACT ATCCCGAATG CAAGTATACC
CGCAAGTTCG CGCAGCCTGG CGGAGCCGAT GGCGACGGCG GCGAGGATGG TGCGCTGGGC
AAGGATCCAG AGACGGGTCT GGAAGTCGTG CGCAAGGCAG GCCGATTCGG CCCCTACATC
CAGCTTGGTG ACGGCAAGGA GGCCAAGCGC GCCTCTATCC CCAAGGACAT TGGCGAACTC
GATCTGGAAT GGGCGCTCAA GCTGCTGTCA CTGCCGCGTG AAGTGGGCGT GCATCCGGAA
ACCGGAAACC CGATCACCGC CAGCATCGGG CGTTATGGCC CCTATCTGGC GCACGACGGC
AAGTATGCGC GGCTCAAGTC CACTGCCGAG GTGTTCGAGA CGGGCATGAA CGCGGCGGTC
ATGCTGCTGG CTGCTGCAGC GGCCGGGGCG GGCGCGCGCG GCAGCCGTGC CGCGGCCGAA
CCCCTCAAGG TCTTCGGCGC GCATCCCACT TCCGGGGGTG AGATCAAGCT GATGGCAGGG
CGCTATGGCC CTTACGTCAC CGACGGCACC ACCAACGCCA CCCTCCCGCG CGACAAGCAG
CCCGAGGCGC TGACGCTGGA AGAGGCGATC ACGCTCATCG ACGAACGTGC CGCCAAAGGC
CCGGCCAAGG GCAAGAAGAA GGCCCCTGCC AAGAAGGCTT CGGCCGCGAA AAAGCCTCCC
GCCGCGAAGA AGGCTCCGGC CAAGAAGGCG GCACCGAAAA AGGCCGCTGC TGCGGAATGA
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| Protein sequence | MQLVIVESPA KAKTIEKYLG PGYKVLASYG HVRDLPVKDG SVRPDEDFAM DWELYGDKQA
RVKAISDAAK GADRLILATD PDREGEAISW HVRELLAKRR VLPKEVERVT FNAITKQTVT
DAMKKPRALD QDLIDAYLAR RALDYLFGFT LSPVLWRKLP GAKSAGRVQS VALRLIVERE
REIEAFRAQE YWSVIARLEH AGTEFAARLV KFDGQKLDKL TLGDEGAAMR AKGVVEAATF
RVEEVETKPT RRNPYPPFTT STLQQEAARK LGFSASHTMR VAQTLYEAGA ITYMRTDGVQ
MDPSAISAAR KAISDRYDGH YLPEKPRHYE TKAKNAQEAH EAIRPTDFSK DRYGSADEAR
LYDLIYKRAM ASQMASANIE RTTVTLRDGT GKHELRATGQ VVKFPGFLAV YEEGRDQKQD
GDEEDGSLLP AMASGDTPAK RGVDATQHFT QPPPRYSEAS LVKRLEELGI GRPSTYAATL
QVLKDRNYVR TEKNRFFAEE SGRLLTAFLE RFFPRYVAYE FTAGMEEELD DVSGGRAEWK
KVLADFWRDF KPKSDEVMEK KPSEVTAELD EFLSDYLFPP RADGTDPRLC PKCEEGRLSL
RGGRYGAFVA CSNYPECKYT RKFAQPGGAD GDGGEDGALG KDPETGLEVV RKAGRFGPYI
QLGDGKEAKR ASIPKDIGEL DLEWALKLLS LPREVGVHPE TGNPITASIG RYGPYLAHDG
KYARLKSTAE VFETGMNAAV MLLAAAAAGA GARGSRAAAE PLKVFGAHPT SGGEIKLMAG
RYGPYVTDGT TNATLPRDKQ PEALTLEEAI TLIDERAAKG PAKGKKKAPA KKASAAKKPP
AAKKAPAKKA APKKAAAAE
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