Gene Saro_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1750 
Symbol 
ID3916325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1844153 
End bp1844938 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID640444491 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_497024 
Protein GI87199767 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.594296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCTGA AGGACAAGTG TGCGCTTGTG ACTGGCTCGA CCTCGGGCAT CGGCCTTGCC 
TATGCGCGGG CTCTCGCGGC GGAAGGGGCG CATATCGTTC TCAACGGCTT CGGCGATCCG
GCCGAGATCG AGGCGCTTTG CCGGGAACTC GCCGACGCCA GCGGCGGACG AGCGATCTTT
GCGGCGGGGG ATCTTACGCG GCGCGAGGGC ACCGAGGCGA TGATGGCGAC GGCGCTGGCC
GAATTCGGCG CGGTGGACAT CCTGATCAAC AACGCCGGCA TGCAGCACGT GGCGCCGGTC
GAGGAGTTCC CGGTCGAGAA GTGGGATGCG ATCATCGCGC TCAACCTCAC GTCGGCCTTC
GATGCCTGCC GGCTCGCAAT TCCGGGGATG AAGGCCAAGG GCTGGGGGCG CATCATCTTC
ACGGCTTCTG CCCACTCGCT CACGGCATCG CCGTTCAAGG CGGCCTATGT CTCGGCAAAG
CACGGGATCG CAGGGCTGAC GAAGACGCTG GCGCTGGAAC TGGCGACGCA TGGGGTGACC
GCCAACTGCA TCAGCCCCGG CTATGTCTGG ACTCCGCTGG TCGAGAACCA GATCCCCGAC
ACGATGAAGG CGCGGGGGAT GACGCGCGAG CAGGTGATCA ACGACGTGCT GCTGACCCGC
CAGCCGACCA AGCAGTTCGT CCAGCCCGAG GACGTGGCCG CGCTGGCGCT GTTCCTGTGC
CGGCACGAGG CGCGCAACAT CACCGGTGCG AACTACAACA TGGATGGTGG CTGGGTGGCG
GAATAA
 
Protein sequence
MFLKDKCALV TGSTSGIGLA YARALAAEGA HIVLNGFGDP AEIEALCREL ADASGGRAIF 
AAGDLTRREG TEAMMATALA EFGAVDILIN NAGMQHVAPV EEFPVEKWDA IIALNLTSAF
DACRLAIPGM KAKGWGRIIF TASAHSLTAS PFKAAYVSAK HGIAGLTKTL ALELATHGVT
ANCISPGYVW TPLVENQIPD TMKARGMTRE QVINDVLLTR QPTKQFVQPE DVAALALFLC
RHEARNITGA NYNMDGGWVA E