| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1717 |
|---|
| Symbol | |
|---|
| ID | 3916292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1804839 |
|---|
| End bp | 1805402 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640444458 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_496991 |
|---|
| Protein GI | 87199734 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0450] Peroxiredoxin |
|---|
| TIGRFAM ID | [TIGR03137] peroxiredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCG TCGGAACCAA GCTGAAGCCG TTCCAGGCTA CCGCTTTCCA TCAGGGCAAG
TTCGTCGACG TCAGCGACGC GGACGTGGTC GGCAAGTGGG GTGTGTTCTT CTTCTACCCC
GCCGACTTCA CCTTCGTCTG CCCGACCGAG CTTGAAGACC TCGCCGGCAT CTATGAAGAG
CTGCAGGGCC TCGGCGTCGA AGTCTACTCG GTCTCGACCG ACACCCACTT CAGCCACAAG
GCCTGGCACG ACAGCTCGCC GGCCATCGGC AAGATCAACT ACTACATGCT CGGCGACCAG
AACCACACGA TCTCGAACAA CTTCGGCATC CTGCGCGAAG GCGTCGGCCT TGCCGACCGT
GGCACCTTCG TGACCGACCC GGACGGCACG ATCCAGCTCG TCGAGATCAC GCCCGAAGGC
GTGGGCCGCA ACGCTGCGGA ACTGCTGCGC AAGATCAAGG CCGCCAAGTA CTGGCGCGAG
CACCCCGGCC AGGTCTGCCC TGCCAAGTGG GAAGAAGGGG CCGAAACGCT TGCTCCGTCG
ATCGATCTCG TCGGCAAGAT CTGA
|
|---|
| Protein sequence | MSIVGTKLKP FQATAFHQGK FVDVSDADVV GKWGVFFFYP ADFTFVCPTE LEDLAGIYEE
LQGLGVEVYS VSTDTHFSHK AWHDSSPAIG KINYYMLGDQ NHTISNNFGI LREGVGLADR
GTFVTDPDGT IQLVEITPEG VGRNAAELLR KIKAAKYWRE HPGQVCPAKW EEGAETLAPS
IDLVGKI
|
|---|
| |