Gene Saro_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1682 
Symbol 
ID3916257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1766893 
End bp1768008 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content67% 
IMG OID640444423 
ProductL-alanine dehydrogenase 
Protein accessionYP_496956 
Protein GI87199699 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0686] Alanine dehydrogenase 
TIGRFAM ID[TIGR00518] alanine dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTCG GAACCGTCCG TGAAATCAAG AACCATGAAT ACCGCGTCGG GCTTACCCCC 
GAAAGCGTCC GCGAACTCGT CGCCCATGGC CACGAAGTGT GGGTCGAAGC CGGCGCGGGC
AACGGCATAG GAGCAAGCGA CGCCGACTAC GAAGGCGCGG GCGCGATCAT CAAGGCCGAT
GCCAGGACCG TGTTCGACGG TTGCGAGATG ATCGTGAAGG TCAAGGAACC CCAGGCCGTC
GAGCGCGCGA TGCTGCGCCG TGGCCAGGTG CTCTACACTT ATCTCCATCT CGCACCCGAT
CCGGAACAGA CCGCCGACCT CGTCAAGTCC GGCGTCACCG CGATCGCCTA TGAAACCGTC
ACCGGCGCGG GCAATGCCCT GCCCCTGCTC AAGCCCATGA GCCAGGTCGC AGGTCGCATG
TCGATCCAGG CTGGCGCGAC AGCGCTCGAA AAGGCCAACG GGGGCCGGGG CGTGCTGCTT
GGCGGCGTAC CGGGCGTGCT GCCGGGCAAG GTCGTCGTCA TCGGCGGCGG CGTGGTGGGG
TTCAATGCGG CGCAGATGGC CGTGGGGCTT GGCGCCGACG TGACCATCCT CGACCGCGAC
CCTGACGTGC TCGAACGCCT CGACAACCAC TTCGAAGGCC GCGCCCGCAC GCTCTATTCG
GGCAAGGCCG CGCTTGCAGC GCTGGTCGCC GAGGCCGACC TCGTGATCGG CGCCGTGCTG
ATCCCCGGCG CCGCCGCGCC GAAGCTGGTC ACGCGCGACA TGCTGGCGAC GATGAAGCCC
GGCGCGGTTC TCGTCGACGT TGCCATCGAC CAGGGCGGCT GCTTCGAGAC CAGCAAGGCG
ACGACCCATG CCGACCCCAC CTATGTCGTC GACGGCGTGG TCCACTACTG CGTCGCCAAC
ATGCCGGGCG CGGTTGCACG TACCAGCACC TACGCGCTGA ACAACGTCAC GCTCCCCCAC
GCGCTGCGCA TCGCGGACAA GGGCTGGAAG GAAGCGCTGC GCGCCGACCC CAACCTCGCA
GCGGGCCTGA ACGTCCACGA GGGCAAGGTC ACTTACGAAG CCGTGGCAAC CGAACTGGGA
TACGAATACA CCCCGGTCGC CGACATTCTC GCCTGA
 
Protein sequence
MRVGTVREIK NHEYRVGLTP ESVRELVAHG HEVWVEAGAG NGIGASDADY EGAGAIIKAD 
ARTVFDGCEM IVKVKEPQAV ERAMLRRGQV LYTYLHLAPD PEQTADLVKS GVTAIAYETV
TGAGNALPLL KPMSQVAGRM SIQAGATALE KANGGRGVLL GGVPGVLPGK VVVIGGGVVG
FNAAQMAVGL GADVTILDRD PDVLERLDNH FEGRARTLYS GKAALAALVA EADLVIGAVL
IPGAAAPKLV TRDMLATMKP GAVLVDVAID QGGCFETSKA TTHADPTYVV DGVVHYCVAN
MPGAVARTST YALNNVTLPH ALRIADKGWK EALRADPNLA AGLNVHEGKV TYEAVATELG
YEYTPVADIL A