Gene Saro_1665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1665 
Symbol 
ID3918774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1745307 
End bp1746230 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content65% 
IMG OID640444406 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_496939 
Protein GI87199682 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACTG GCGAATACGA GCGGCGGGAC ACCGTGCTGG TGGTGGACGA CGAGCCGGAT 
TCGCTGCGTT TCCTTGCGGA TACGCTGGAG GGCGCGGGTA TCCGGGTGCT TGTCGCGATT 
TCGGGCGATG CGGCTCTCGA CGTGCTGCAG CATGTGGAGC CGGACCTGAT CCTGATGGAT 
GGGGTAATGC CGGGGAGAAG CGGCTTCGAG ACGACGGCGT GCATCAAGGC GCGCCCCGAA 
CTTGCCCATG TGCCGGTCGT CTTCATGACA GGGCTGCACG ACGACGAACA CGTCGTCCGC 
GGTTTCGAGG TGGGCGGGGT CGACTATCTG CGCAAGCCTG TGAATGTCCA GGAACTGCTT 
GCGCGGGTTC GGGTTCACGT TGGCAATGCC CGCGCAATCC AGGCGGGTGC CGCAGGCCTC 
GACGCGACTG GTCGGCTGAT GATGGCGACG GACCTGCAAG GTGGCTTGCT ATGGTGCACA 
CCCTTGGCCG AACGGGCGAT AGCGCGGGCA TGTCCGGGCT GGAGCCGCGA CGCAGGCGCG 
CTACCGGATG CCCTTCGCGA ACCGGTCCGC AAGATGCTGG GGCGCGGTGC GGCGCAGTCT 
GGGTCAGTCA AGGTCGAGCA GGTCGACGGC ACGATGGAAC TGGTCGTGAT CGCGCAGTAT 
CGCGGGCAGG AAGTCCTGAT CCGAGTGAAC GAGCTGAACC CGAAAGCCGA CATCGCCCTG 
CTGCAGCAGA AGCTGGGCCT TACCGACCGG GAGGCCGAAG TGCTGCTGTG GACCAGCTAT 
GGCAAGTCCA ATGCGACGAT ATCGGAAGTC CTCGCCATCA GCCCCCGCAC GGTCCAGAAA 
CATCTGGAAC GCATCTACGA AAAGCTGGGG ATCGAAACCC GCGCAGCCGC AGCGGCGGTC 
GCGATCAAGG CGCTGGGCAA CTAG
 
Protein sequence
MTTGEYERRD TVLVVDDEPD SLRFLADTLE GAGIRVLVAI SGDAALDVLQ HVEPDLILMD 
GVMPGRSGFE TTACIKARPE LAHVPVVFMT GLHDDEHVVR GFEVGGVDYL RKPVNVQELL 
ARVRVHVGNA RAIQAGAAGL DATGRLMMAT DLQGGLLWCT PLAERAIARA CPGWSRDAGA 
LPDALREPVR KMLGRGAAQS GSVKVEQVDG TMELVVIAQY RGQEVLIRVN ELNPKADIAL 
LQQKLGLTDR EAEVLLWTSY GKSNATISEV LAISPRTVQK HLERIYEKLG IETRAAAAAV 
AIKALGN