Gene Saro_1630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1630 
Symbol 
ID3918739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1705501 
End bp1706886 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content68% 
IMG OID640444371 
Producthypothetical protein 
Protein accessionYP_496904 
Protein GI87199647 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0107193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGCG TCGCGCGCTA TCGCACGATT CAGCGCTGGC ACTTCCTGGC CGGCCTGTTC 
GTGATGCCGA TGCTCCTGCT GCTGTCGGTG ACGGGGGGAA TCTATCTGTT CAAGCCGCAG
GTTGATGCCT GGGAGGAGCG GGCGTTCGAC GCGGCTGCCA TGGCCGAGGC GCCATCGCTG
GCGGTCGCGC CGGATGACCA TGTGGCGGCC GCTCTGCGGG CATTTCCGCA TGGCTCGTTC
CGGTCCTACC GCCTGCCGCG CTCAGAGGGC GCGGCAGCGC TCGTGCTTGT CGGTCTTCCC
GACGGAGGCT CTCGCGAAGT ATTCGTTTCT CCGCACGGCA GGGTCGTTGG CACCATGGAT
CCGCGCTGGC GGATCATGCA AGTGGTCCAC GACGTTCACG GGCAGTTGCT TGTCGGTCCG
CGCGGGAGCT GGCTGGTCGA ACTGGCTGCC AGTTGGTCCA TCGCGATGAT CGCGGGCGGG
CTCTACCTTT GGTGGCCACG CGGGCGGGGC ACTGCGGGCG TCCTGTGGCC GCGGCTGCAT
CTTGGCGCGA GGGCGGCCCT GCGCGACATG CATGCGGTGA CCGGCTTCTG GGTTTCCGGG
CTTGCGCTTG TCCTGCTGGT GACTGGCCTG CCGTGGGCGG ACGTCTGGGG CAGCGCCTTC
AAGGCGGTGC GGGCCGAGTT CGGCTGGCAG AAGGGCGTGC AGGACTGGAC CATCGGCGGA
CGTGCGCCCG ATGCCGGTGA GCACTTCGGG CATGAAGGCA TGGGGGATGC CGCGCAATCG
CCGGTTACGG GGCGGCCGGT CCACGCGCAT GGAAGCCATC ATGGGAACGG CGCGACCGGC
CCGTTCCTCG CCGAGATCGT GGCCAGGGCA AAGAGTGAGC GGCTTGCATT TCCCGTGGTG
GTGACGCCCC CGGGCGCACC CGGTCGCTTT GGAGGAAATA GCGTTGCGGC GTGGACCGTG
CGCTCGGACA CGCAGAACCG GACCTTGCGG GTGACGCTTA CCTATGATGC GCGAAACGGG
CGCGAGACAT CTCGCGAAAC CTTTGCCGAC AGGCATCCCA TCGACCGGGT CATCGGATAT
GGCGTCGCGT GGCATGAGGG GCAGCTCTTC GGGCCGGTCA ACCAACTGAT CGGCGTGCTG
ACCGTGACCG GGCTTGCCGG GATGAGCGTG ACCGGTTTCC TGATGTGGCG GCGGCGCAAG
TCCGCGGCCG GTGTCGGGGT GCCCGCTGCC GCGCGGTCCG GCCGTGCAGG GTGGGGATCT
TGGCTGGCGC TTGGCACGCT GGCGGCGGTG TTGCCGCTGC TTGCCTTGTC GCTGGTGGCG
GTCCTGGCGC TGCAATGGCT GCGGCAACGC ACGCCGGATA GCGGAACCGG GCGACTGGCC
TCGTAA
 
Protein sequence
MSRVARYRTI QRWHFLAGLF VMPMLLLLSV TGGIYLFKPQ VDAWEERAFD AAAMAEAPSL 
AVAPDDHVAA ALRAFPHGSF RSYRLPRSEG AAALVLVGLP DGGSREVFVS PHGRVVGTMD
PRWRIMQVVH DVHGQLLVGP RGSWLVELAA SWSIAMIAGG LYLWWPRGRG TAGVLWPRLH
LGARAALRDM HAVTGFWVSG LALVLLVTGL PWADVWGSAF KAVRAEFGWQ KGVQDWTIGG
RAPDAGEHFG HEGMGDAAQS PVTGRPVHAH GSHHGNGATG PFLAEIVARA KSERLAFPVV
VTPPGAPGRF GGNSVAAWTV RSDTQNRTLR VTLTYDARNG RETSRETFAD RHPIDRVIGY
GVAWHEGQLF GPVNQLIGVL TVTGLAGMSV TGFLMWRRRK SAAGVGVPAA ARSGRAGWGS
WLALGTLAAV LPLLALSLVA VLALQWLRQR TPDSGTGRLA S