Gene Saro_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1587 
Symbol 
ID3918695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1645775 
End bp1646542 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content64% 
IMG OID640444327 
ProductTetR family transcriptional regulator 
Protein accessionYP_496861 
Protein GI87199604 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0494603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTAA GGTCGGCCGC GACGGGGGAA GCGCTTCGCG CGGAGCGTGG GGCCCCGTGT 
GATGTCGCGG AGATTGCCCC CTTGTCCGAA ACCGAAGCTT TCGACACCCA GCGTGCAGAT
ATGGAAACTG CCTCGAAGCC CGCGCGCCGC AGTCGCGCGG AAAGCCGCGA GCAGGCGATC
AACCAGATCA TCGACATCGC GACGAACGAA TTTGTCGAGA AGGGGCTTGC CGGGGCCCGT
ATCGATGAAA TCGCGGGCAA GGCGACCAAG CGCAAGATCT ACTACTACTT CGAGGGCAAG
GACGAGCTGT ATCGCGCCGT GCTGGAGCGG GCATACCGCC GGGTGCGCGA GAGTGAATCG
CAAGTCGACG TCGAAAGCGG CAGCGCCGCC GACGCACTGC GCCGCCTGAT CGAGCATGAC
GTGCGCTACC ACGCGCGCCA CCCCGAGCTT GTGCGCCTGG TGATGAACGA GAACATCCAC
CGCGCCGAAC ACCTCAAGCA GATCGATACC CTGCCGCAGG GCAACCGGCG GGTCATCGAG
ATACTCGAGC GGATCATCGA ACGCGGCGTC GCCGAAGGGC AGTTCCGGGC CGGGATCGAC
CCGGTGGACC TGCACCTCAA CATGACCGCG CTCAGTTTCT ACAACGTCTC CAACCAGTTC
ACCTTCGCTC ACAACTTCGG GGTCGACATG ACCAGCCCCG CAGCGATCGA GCGCCGGGCC
GGGCAGGTGG CGGACATCAT CCTGGCCTGG GTGACGAAGA AGGACTGA
 
Protein sequence
MPLRSAATGE ALRAERGAPC DVAEIAPLSE TEAFDTQRAD METASKPARR SRAESREQAI 
NQIIDIATNE FVEKGLAGAR IDEIAGKATK RKIYYYFEGK DELYRAVLER AYRRVRESES
QVDVESGSAA DALRRLIEHD VRYHARHPEL VRLVMNENIH RAEHLKQIDT LPQGNRRVIE
ILERIIERGV AEGQFRAGID PVDLHLNMTA LSFYNVSNQF TFAHNFGVDM TSPAAIERRA
GQVADIILAW VTKKD