| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1560 |
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| Symbol | |
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| ID | 3917235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 1617712 |
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| End bp | 1618485 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640444300 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_496834 |
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| Protein GI | 87199577 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0890906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACGG GATTGGCCAA GCAAACGGCC GGAGAACTGG AAGGCAAGGT CGCAATCGTG
ACCGGCGCAT CGCGCGGTTT AGGCAAGGCG ATTGCTGCGC TCTATGCTGC GGAAGGCGCG
CACGTGGCGC TCGTCGATCT AAAGCAGCAC TGGGCGGAAG CCGCAGCAAC GGAAATCGGC
AATGGCGCCA TCGGACTTGG TGCAGACGTG TCGGACCGTG CCGCATTGAC GGCGGCGATT
GATGAGGCCG CCGCACGGTT CGGCAAGATC GACGTGCTGG TCAACAATGC GATGTGGAAC
AGCTATGACC TGATCGCCGA CATCACCCCC GAAATCTTCG CTCGGATGAC TGGCGTTGGC
CTGGGCGGGA TCGTCTGGGG CATCCAGGCG GTGTTGCCGC ACATGCCCGA AAGCGGCGGG
GCCATCGTCA ACATCGGTTC GATGGCCGGG CGTTTGGGGA GCGCGGGCGC GCTGCTCTAT
GCTGCGGTCA AGGCGGGCGT GGACGGCCTT ACCCGTTCTG CTTCGGTCGA GCTTGGCCCG
CGCAGCATCC GCGTAAACGC GATCGCGCCT TCGACCGTGG CGACGGAAGG CGTGAAGGCG
ATCCTCACGC CCGAGCAATT CGAAAGCCGC GTTGGACAGA CGCCGCTCGG CAGGCTGGGC
GAGATTGACG ACATTGCCCA GGCAGCGCTC TGGCTGGCAG GCGCGCGATC GGGCTTCGTC
ACGGGCCAAT CGCTTGCCGT GGACGGAGGC CTTGGCCACA CGCTGCGACG CTAG
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| Protein sequence | MDTGLAKQTA GELEGKVAIV TGASRGLGKA IAALYAAEGA HVALVDLKQH WAEAAATEIG
NGAIGLGADV SDRAALTAAI DEAAARFGKI DVLVNNAMWN SYDLIADITP EIFARMTGVG
LGGIVWGIQA VLPHMPESGG AIVNIGSMAG RLGSAGALLY AAVKAGVDGL TRSASVELGP
RSIRVNAIAP STVATEGVKA ILTPEQFESR VGQTPLGRLG EIDDIAQAAL WLAGARSGFV
TGQSLAVDGG LGHTLRR
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