| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1553 |
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| Symbol | |
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| ID | 3917228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 1609227 |
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| End bp | 1610573 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640444293 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_496827 |
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| Protein GI | 87199570 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1956] GAF domain-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00827304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGC GCCTCGCCGA CCTGGCTCCT TGCTTCGAGG GAGTGATTCC TTCGATCATC
GCGACCGCAG CGGCCGACGG GACGCCGAAC GTTTCCTACC TGTCCCACGT CGTCCGGGTC
GATGACGAGC ATGTCGCGCT GTCGAACCAG TTCTTCGCCA AGACCGCCGC GAACATCCGA
GCTAATCCCC ATGTTACGCT GATCCTCGTC GATTGTTTTT CCGGGGAACA GTACCTGCTC
GACATCCGGT TCGTGCGGTC ACTCGACACT GGGCCATTGT TCGAGAAGAT CTCGATTCAA
CTCAAGGCAA GCAGCGCGCA GATCGGCATG TCCGAGATCA TGCGGCTAAG GAGTGCCGAC
GTATTCAGGG TGGAAGCGAT CGAGAGGGTT CCCTGTCCGG TTGACACCGG CCCGGCACAG
GTGCCCCGCC CGCCGGTAAG CCTTCCCGCG CTTGCGGACG GCTGCCGGGC CATCGAAAAT
CTGGCGGAGG TGGAAGATAT CATCGACTGC CTGCTCGACC GCGTTGTCGG CCTGCTTGGC
TATTCGCACG CGCTCGTTCT TGTCCCCGAT CCGGGCCGCG ACAGCTTCGT CACGACGGGC
AGCACAGGCT ACGACCCCTC CGGGATCGGC TCCGAGGTCA AAGGCAGCGA GGGCATGATC
GGTACGGCGG CCGCAAGCGG ACGCACGATC AAGGTTAGCG ACATGAGCCG CGTGCGTCGC
TTTGCCGAAG CAATCGATGC CGACGCAGGG CTGTCCGAAA ACACGTCGCG CGTGATCGAC
TTTCCCGGAC TTGCCGGCGT CATGAGCCAG ATCGCCGTGC CGATGGTTAC GCGGGGCGAA
ACGATCGGCA TCCTCTTCGT CGAAAGCCCG GAGCGCATGG CGTTTCACGA CGATGACGAG
GCAGCGCTGG AATTGCTATG CGCTGCGGCT GCGCGTGCGA TCGCGGCAGG TGAAAGCATT
GCGTCAAGGG ACGATGATGC TTTGCCAGGC GCCGCGCGAT CGCTGCCTGT AGCGAATGGC
GGCGCGATCC GCGTCACGCA TCACCGCCTC GACGACAGTA TCTTCGTGGA CGGCAACTAT
ATCGTGAAGG GGATCGCGGG CGCGGTGTTG CGCCGTATCA TCGAATGGCA CCTCGTTGAC
GGCAGGAACA CGTTCTGCAA CCGCGAACTG CGGCTCGCGC TCGCCGCGCG GATGCCCGAT
ATCAAGGACA ATCTGGAAAC GCGCCTGTTG CTGCTTCGCC GCCGGCTCGA AGAGAAGCAA
GCGCCGATCC AGATCGTCAG GACAGGTCGA GGAAGGCTGA GCCTTGAGGC GAAGGGGCCG
CTGCTCCTCG CAGCGGCCCA GGATTGA
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| Protein sequence | MKLRLADLAP CFEGVIPSII ATAAADGTPN VSYLSHVVRV DDEHVALSNQ FFAKTAANIR
ANPHVTLILV DCFSGEQYLL DIRFVRSLDT GPLFEKISIQ LKASSAQIGM SEIMRLRSAD
VFRVEAIERV PCPVDTGPAQ VPRPPVSLPA LADGCRAIEN LAEVEDIIDC LLDRVVGLLG
YSHALVLVPD PGRDSFVTTG STGYDPSGIG SEVKGSEGMI GTAAASGRTI KVSDMSRVRR
FAEAIDADAG LSENTSRVID FPGLAGVMSQ IAVPMVTRGE TIGILFVESP ERMAFHDDDE
AALELLCAAA ARAIAAGESI ASRDDDALPG AARSLPVANG GAIRVTHHRL DDSIFVDGNY
IVKGIAGAVL RRIIEWHLVD GRNTFCNREL RLALAARMPD IKDNLETRLL LLRRRLEEKQ
APIQIVRTGR GRLSLEAKGP LLLAAAQD
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