Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1518 |
Symbol | |
ID | 3917193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1562441 |
End bp | 1564003 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640444259 |
Product | hypothetical protein |
Protein accession | YP_496793 |
Protein GI | 87199536 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4961] Flp pilus assembly protein TadG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCTTA CACTGATCCG GAGTGGTCTG AAGGACGAAA CAGGCGCCGT CGCGGTGACG TATGCACTGG CACTGACCGG CCTGATCGCG ATGGTCGGCA TTGGCTACGA CGTCAGCCAG GTGCTGACGC TGGACAGCGA ACTGCAAAAT GCAGCAGATC AGGCTGCACT TGCCGCAGTG ACCCAGTTGG ATCGGCAAAG CGGTGCTATC GACCGTGCAA AGAATGCCGC AAATTCGCTG ATCGCGAACA ACACGCTGCT GGCAAAAGAT GCCGGGGTCG TGACGATCAA GGAAGCAGGC TTCGCATTCT ATGCCACCAG GGCAGATGCG GAAGCTGGGG CAAACCCCAC AACAGACAAT GCGCGAGCGC GTTTTGCAAA GGTGGAGGTC AATGGCCGGA GCGCACAGTA CGCGCTCACC CCCATTGGCT CTGCCGTAGC AAGCTGGGTT TCGCCCACTC TCTCCGCCGC AGCCGTGGCA GGTATCGGCT CTGCAATTTG CAAGGTCCCG CCGATGAAGA TCTGCGCGCC CAGCAACGAT CTCAGCTTCA ACCAGGATTA CGTCGGCAAA GGTCTGTTGC TCGACACTAC CTCCAATAGC GGCTTGCAAC TCCAGTTTCT TGGTGATGCC AGCAACACGC CTTCGATCCG CAAGGCTCTT TCGGCCGATA GTCCGACTGG CGATTGTCTC GACGAGGAAA ACCTCGCCGT AGGTTCGCAG GCAGGCTCTG CCGTGGCCGC TGCCCTTAAC ACGCGGTTCG ACATCTACGA TGCTGGCGGC AACTCCCAGA ACGCGTGCCC CTCTGGTGTG ACATGCAGCC CGGCGCTCAA TTCGTCCAAG GATCTCATTC GTAAAACCAA CAGCGGTGGG GCCTGCCTTC TCAGCCAGAA TGGAACGCCC GCAGGATCGT GGTTCTGGCC CGAACTCAGC ACATACGGCT TCGATGCGTC CGGAACCGTG TTTCCCCTGT CGGACGTGAA GTTCATGGGG CATCCACGGG ATGATTGCCA CGCCAAGGGC GGTGCGACCG GTTGCGGCGG CGCGACGGGC GTTGGCGACG GCGTCTGGAA CATCGACTAT TATTTCCGCT CGAACTACGG GCTGGATTGG ACGACGCTTG GCATCTCGAT GCCAGCCGGA AAGTCGATTC CCCGCCGTTA CGATGTCTAC AAATGGGAAC TCGCGCGCTG GGCGTCCAAT CCGTCCGAAA AGACCCGGGC GGTGGGGAGC GACACAGCCT ATCGCGGCCC CGTCTGCAAT ACGGCAAGCA CTCCCATATC GGGTACGGAT CGGCGCGTGT TTCCTATCGC CGTCGTCGAC TGTACCTCTG CGGCCACTTC TCAGGTCGTG AAAAAGTGGG TGAACGTCTT CCTGGTTGAA CCTTCGCTCA ACCGGGGCAG CGCGCCTCCC CCAAATCCGC CCAAGAATGG TCCGAAGAAG AACTACTATC GAAGCACGGC CGCCGAAGTC TACGTAGAGG TCGTGTCCAT CGCCAAGCCG GGCAACGATG ACGGCGGCGA TGCAAACGTC ATTCGTCGCG ACAAGCCGTA CCTTGTCAAA TGA
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Protein sequence | MPLTLIRSGL KDETGAVAVT YALALTGLIA MVGIGYDVSQ VLTLDSELQN AADQAALAAV TQLDRQSGAI DRAKNAANSL IANNTLLAKD AGVVTIKEAG FAFYATRADA EAGANPTTDN ARARFAKVEV NGRSAQYALT PIGSAVASWV SPTLSAAAVA GIGSAICKVP PMKICAPSND LSFNQDYVGK GLLLDTTSNS GLQLQFLGDA SNTPSIRKAL SADSPTGDCL DEENLAVGSQ AGSAVAAALN TRFDIYDAGG NSQNACPSGV TCSPALNSSK DLIRKTNSGG ACLLSQNGTP AGSWFWPELS TYGFDASGTV FPLSDVKFMG HPRDDCHAKG GATGCGGATG VGDGVWNIDY YFRSNYGLDW TTLGISMPAG KSIPRRYDVY KWELARWASN PSEKTRAVGS DTAYRGPVCN TASTPISGTD RRVFPIAVVD CTSAATSQVV KKWVNVFLVE PSLNRGSAPP PNPPKNGPKK NYYRSTAAEV YVEVVSIAKP GNDDGGDANV IRRDKPYLVK
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