Gene Saro_1506 details

Gene Information

• Locus tag: Saro_1506
• ID: 3917181
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 1551018
• End bp: 1551734
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640444247
• Product: transposase
• Protein accession: YP_496781
• Protein GI: 87199524
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3316] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCAGGT GCCGCAAATC GTCCAGTCCA TTTCGCTATT TCAAGACTTC GCCGGAGATC 
ATTCGGCTGG CGGTGCTGAT GTATGTCCGT TTCCCGCTGT CTCTGCGCAA CGTCGAGGAC 
CTGCTCGCCG AGCGCGGCAT CGACATCTGC CACGAGACGG TGCGGCTGTG GTGGAACCGG 
TTCGGACCGA TGTTCGCATC AGAGATCCGG CGCCAGCGTG TCAGTCGGAT GCGAGGTTTT 
CGTCAGTGGC GCTGGCACCT TGATGAAGTG TTCGTCAAGA TCAACGGCGA GCGCCATTAC 
CTGTGGCGGG CGGTGGATCA CGAGGGCGAG GTACTCGAGA GCTACGTCAC CAAAACCCGC 
GACAAGGCTG CGGCTCTGAC CTTCCTGAAG AAGGCATCGA AGCGGCACGG TCGGGCCGAA 
GCAATCGTGA CCGACGGCCT TCGGTCATAC CCGGCCGCGA TGCGCCAACT CGGCAATCTT 
GATCGACGGG AAATGGGGCG ATGGCTAAAC AATCGGGTGG AGAACAGCCA CCTGCCATTT 
CGCCGACGAG AACGGGCGAT GCTGCGCTTC AGGCAGATGA AGACGTTGCA GAAGTTCGCC 
TCCGTCCATG GCTCGCTCCA TAACCATTTT TCCCAGGACC GTCACCTCAT CGATCGCATG 
ACCTACAAGC AGCGCCGCTC GGCAGCCCTT GCCGAGTGGC AGACGCTCAT GGCCTGA 

 

Protein sequence

MPRCRKSSSP FRYFKTSPEI IRLAVLMYVR FPLSLRNVED LLAERGIDIC HETVRLWWNR 
FGPMFASEIR RQRVSRMRGF RQWRWHLDEV FVKINGERHY LWRAVDHEGE VLESYVTKTR 
DKAAALTFLK KASKRHGRAE AIVTDGLRSY PAAMRQLGNL DRREMGRWLN NRVENSHLPF 
RRRERAMLRF RQMKTLQKFA SVHGSLHNHF SQDRHLIDRM TYKQRRSAAL AEWQTLMA