| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1407 |
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| Symbol | trmD |
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| ID | 3916071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1450001 |
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| End bp | 1450741 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640444150 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_496685 |
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| Protein GI | 87199428 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.885159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCTTCG CCGCCACCGT ACTTACTCTC TATCCCGAGA TGTTTCCCGG TCCGCTGGGC
GTGAGCCTTG CCGGGCGCGC GCTGCGCGAG GGGGCGTGGG CGATGGATGC GGTGCAGATC
CGCGATTTCG CCATCGACAA GCACAAGACC GTCGACGACA CGCCCGCTGG TGGCGGGGCG
GGGATGGTGT TGCGGGTGGA TGTGCTGGCC AAGGCCATCG ACCATGCTCG AGAGGCGCAT
CCGGGGTGCC CGGTTATCGC CATGACGCCG CGCGGCAAGC CGCTCACGCA GGAGCGTGTG
CGGCAGCTTG CGGACGGGCC GGGCGTGATC GTCCTGTGTG GCCGGTTCGA GGGCTTTGAT
GAGCGGATTT TCGCCGGGAG AGAGGTCGAG GAAGTCTCGG TCGGCGACAT CGTGCTGTCC
GGCGGCGAAT GTGCCGCCCT GATGCTGCTG GACGCTTGCA TTCGGCTGCT TCCCGGCGTA
ATGGGCGCGG CTTCTAGCGG GCATGAGGAG TCGTTCGAGA ACGGCCTCCT GGAATACCCG
CACTATACCC GACCTGCTGA GTGGGAAGGG CGCACGATCC CTGAAGTGCT GCGATCGGGG
GATCATGCGA AGATCGCGGC TTGGCGCAAG TCACAGTCCG AGATCGATAC ACGGTTACGC
AGGCCGGACC TTTGGGAGCG CCACATCGGC GCTCGGGTCC AGTCTGCCTC TGGCGCGCAG
CGTGAAGTGC AGGACGATTG A
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| Protein sequence | MTFAATVLTL YPEMFPGPLG VSLAGRALRE GAWAMDAVQI RDFAIDKHKT VDDTPAGGGA
GMVLRVDVLA KAIDHAREAH PGCPVIAMTP RGKPLTQERV RQLADGPGVI VLCGRFEGFD
ERIFAGREVE EVSVGDIVLS GGECAALMLL DACIRLLPGV MGAASSGHEE SFENGLLEYP
HYTRPAEWEG RTIPEVLRSG DHAKIAAWRK SQSEIDTRLR RPDLWERHIG ARVQSASGAQ
REVQDD
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