Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1377 |
Symbol | |
ID | 3917831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1423743 |
End bp | 1426460 |
Gene Length | 2718 bp |
Protein Length | 905 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640444119 |
Product | surface antigen (D15) |
Protein accession | YP_496655 |
Protein GI | 87199398 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0662411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGGAC GTAACGCGGT ACGTAACTTG CAGGCTCCGG GCCTGGGCGC GTTCCTGCTG GCGACAACCG CGTTGGCCGT GGTTCCTTCC CTGGCGATGG CCCAGGCAGG CGGTCCTCCG CCGCGTGGCG CACCGCCGCC GGGCGGCATG CGGGGCGAGC CGCCCGTGGC TCCGCCCGAA GCGCGCGCTG TCGAGCCGGG TCCTGCCGCA CCCGAAGGCA CTCCCGCCGA GCAGATCATC AAGTCGGTCA CCGTGCAGGG ATCGCAGCGT CTCGAGCCGG ATACCATCCT GTCCTATATC CGTCTGCGTC CGGGCCAGGC CTATTCTCAG GCTGCCGCCG ACCAGGCGCT GAAGGATCTC TACGCGACCG AGCTTTTCGC CGACGTCTCG ATCCGCAACA ACAGCGGCGA CGTTGTCGTG CAGGTCAAGG AAAACCCGGT CATCAACCGC ATCATCCTTG AAGGCAACAA GCGCCTCAAG GAAGACAAGA TCCTGCCCGA GATCAAGCTC GCGGCGCGCC AGATCTTCAC GCGTTCGAAG GTCCGCGCAG ACGTTGCGCG CATCATCGAG TTGTACAAGC GCCAGGGGCG CTTCGCCGCG ACGGTCGAGC CCAAGATGGT CATGCTCGAC CAGAATCGCG TCGACATCGT GTTCGAGATC AGCGAGGGGC CGAAGTCCAA GGTTCGCCAG ATCAACATCA TCGGCAACGA GAAGTTCTCC GACAGCGAGC TTCGCGGCGA GATGGTGACC AAGCAGGCGC GCTTCTTCCG GCTGTTCTCC AGCGGTACCA GCTACGACCC GGACCGCCTC GCTTTCGACC AGCAGAAGCT GCGTCAGTTC TACCTGACCG AAGGCTATGC CGATTTTCGT GTCGTCTCGG CCGTGGCCGA ACTCACGCCC GACAAGCGCG ACTTCATCAT CACCTATGTG GTCGAGGAAG GCGAACGCTA CAAATTCGGC GACGTGAAGG TCGACAGCCA GATTCGCGAC TTCGACAGCG AAGCGCTGGC CAAGCGCCTG CCGATGAAGG CGGGCGACTG GTACAACGCA AAGATGGTCG AGGACCAGGT CGACGCACTC ACCGAGACGG CGGGCGCGTT CGGCTATGCC TTTGCCGACG TGCGGCCCGA CTTCTCGCGC AACAAGGACG ACCTGACGAT GTCGGTCAAC TTCCGCATCG CGGAAGCGCC ACGCGTCTAT GTCGAGCGTG TCGACGTCAA CGGCAACACG CTGACCCAGG ACAAGGTCGT CCGCCGCGAG TTCCGTCTGG CCGAAGGCGA TGCCTTCAAC ACCTTCCAGA TCAAGCGCTC GACCAACCGC ATCAAGTCGC TCGGCTACTT CCAGGAGAAG TTCGAGATCG AGCAGAAGCC GGGCAGCGCT CCGGACCGCA TCATCCTCGA AGCCAACGTT GAGGAACGGC CCACCGGCGA ACTCCAGCTT TCGGCCGGCT TCTCGAGCCT CGAGAGCTTC ATCTTCCAGG GCTCTATCCG CCAGAACAAC TTCCGCGGTC GTGGCCAGAC GATCGGCCTG TCGGTCGACT ATTCGCGTTA TACGCGTTCG GTCCAGGTAA GCTTCACCGA GCCCTACCTG TTCGACAAGA ACATCTCGCT GGGCGTCGAC GTCTACCGCC GCGACCTCAA CAGCTTCAAC TACTTCAACT CCGACCGCAA CACGACCTAC AAGCAGGCGA CGACCGGCTT CCAGATCCGC GCCGGCGTGC CGCTGACCGA ATACATGTCG CTGATCGGTC GCTACACCTT CAACCTCGAC GACGTGACGC TGTCGAAGAG CCAGTTCTAC GCCGACCTCA ACGGCGACGG CGTGCAGACC TGCGAACCGC TCCTGGCCGG TCGATACCTG TGCGATGCCA TCGGCAAGCG CACCAGCTCG ATCATTGGCG CCTCGGTGGT CTACGATACG CTGGATAACC GCCTGCGCCC GAGCAGGGGC TCGCAGTTCG TGATCGGCGG CGACATTGCC GGACTCGGCG GTTCGGTGAA GTACGCACGC CTCACCGCGA ACGCGGCCCG GTTCTTCCCG CTCGGCAGCG GCTTCATCTT CTCGGTTCGC GGCGAGGGCG GGATCATCAA GGCGCTGGGC AGCCGTTCGG ATGATCCAAG CATCGACGAC GTGCGCCTGA CCGACCGCTT CTTCCTTGGC GAGCCGCAGA TCCGCGGCTT CGACATCCGC GGCGTCGGGC CGCGCGTGCT CCGCAAGTAT CTCGTCGATA CCAACGGTGA CGGGACGGTG GACACGCCTT CGACCGACCG CAACCAGTGG GTCGATGACG CGCTGGGCGG CAAGTACTAC TACCTGAGCC GTGCAGAACT GGAGATTCCG CTGGGTTCCG GCGCGCGCGA ACTTGGCCTG CGTCCATCGA TCTACCTCGA CGCCGGTGCA GTCTGGGGCG TCAATCGTCC GCAGACCCAG AACGTGAACT CGGCGGTTAC GCTCTACCGT CAGACCTACC AGGGGACGAC GACGATCGTC ACCAGCCCAA CGGCACCCGA CAACACGGCC AACACCGTCT ACACGGCCAT TCCGGCCTAT GTGGAGGAAT ACGTGGGTGA CACGCCATCG CCGCGTGTTT CCGTCGGTAT CGGCGTCAAC TGGAACTCGC CATTCGGCCC GTTCCGTCTC GACTTCGCCA AGGTCCTCAA GAAGGCCAAC GGCGACGACC CCAAGACTTT CACCTTCAAC GTGGGAACCC AGTTCTGA
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Protein sequence | MIGRNAVRNL QAPGLGAFLL ATTALAVVPS LAMAQAGGPP PRGAPPPGGM RGEPPVAPPE ARAVEPGPAA PEGTPAEQII KSVTVQGSQR LEPDTILSYI RLRPGQAYSQ AAADQALKDL YATELFADVS IRNNSGDVVV QVKENPVINR IILEGNKRLK EDKILPEIKL AARQIFTRSK VRADVARIIE LYKRQGRFAA TVEPKMVMLD QNRVDIVFEI SEGPKSKVRQ INIIGNEKFS DSELRGEMVT KQARFFRLFS SGTSYDPDRL AFDQQKLRQF YLTEGYADFR VVSAVAELTP DKRDFIITYV VEEGERYKFG DVKVDSQIRD FDSEALAKRL PMKAGDWYNA KMVEDQVDAL TETAGAFGYA FADVRPDFSR NKDDLTMSVN FRIAEAPRVY VERVDVNGNT LTQDKVVRRE FRLAEGDAFN TFQIKRSTNR IKSLGYFQEK FEIEQKPGSA PDRIILEANV EERPTGELQL SAGFSSLESF IFQGSIRQNN FRGRGQTIGL SVDYSRYTRS VQVSFTEPYL FDKNISLGVD VYRRDLNSFN YFNSDRNTTY KQATTGFQIR AGVPLTEYMS LIGRYTFNLD DVTLSKSQFY ADLNGDGVQT CEPLLAGRYL CDAIGKRTSS IIGASVVYDT LDNRLRPSRG SQFVIGGDIA GLGGSVKYAR LTANAARFFP LGSGFIFSVR GEGGIIKALG SRSDDPSIDD VRLTDRFFLG EPQIRGFDIR GVGPRVLRKY LVDTNGDGTV DTPSTDRNQW VDDALGGKYY YLSRAELEIP LGSGARELGL RPSIYLDAGA VWGVNRPQTQ NVNSAVTLYR QTYQGTTTIV TSPTAPDNTA NTVYTAIPAY VEEYVGDTPS PRVSVGIGVN WNSPFGPFRL DFAKVLKKAN GDDPKTFTFN VGTQF
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