Gene Saro_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1366 
Symbol 
ID3917820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1414307 
End bp1415065 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content65% 
IMG OID640444108 
Productphosphatidylserine decarboxylase 
Protein accessionYP_496644 
Protein GI87199387 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00164] phosphatidylserine decarboxylase precursor-related protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCGAA TGTCCGGAGA AATACTCGAT AACCGCGGTC GCGGCACCGC CGGATGGTCA 
TGGCCATCCA TCCACCCCGA AGGCCGCAAG TTCGGCCTCA TTGCCGCAGT GGCCAGCCTT
GGCGCGGCGC TCATGGCGTG GGAGACCATC GCCTGGCCAC TGGCGTTCCT CACGCTGGGC
GTGCTGGCGT TCTTCCGTGA TCCGGTTCGC GTCACGCCGC GTGACGACCG CTTCGTGGTG
TCCCCTGCCG ACGGCCTGAT CACGTTGATC CAGAAGGTTC CGCCCCCGCG CGAACTTTGC
GCCGATGACG GCAGCGGCGT GCGCGGCATG AACGATGCGC CGGTAACGCG CGTTTCGATC
TTCATGTCGG TGTTCGACGT TCATATCAAT CGCTCGCCCA TCGCCGGAAC GATTCGTCGC
GTGGTCTATA TCCCGGGCAA GTTCCTCAAC GCCGATCTCG ACAAGGCGAG CGAGGAAAAC
GAGCGCCAGC ACTTCCTGGT TGAGCGCGCG GACGGCGTGC AGATCGGCTT CACCCAGATC
GCAGGGCTGA TTGCCCGCCG TATCGTGCCC TTCGTGAAGG GCGGCGACAT CGTCGCGGTC
GGCCAGCGCG TCGGCCTGAT CCGCTTCGGC AGCCGGGTCG ACGTCTATCT TCCGGCCGGA
ACGGAGCCGA AGGTGCTGAT GGGGCAGAAG GTGATCGCGG GCGAGACGGT GCTTGCCGAA
ATCGGCGAGG CGCCGATGAT CGAGGGTATC GGGCAGTGA
 
Protein sequence
MGRMSGEILD NRGRGTAGWS WPSIHPEGRK FGLIAAVASL GAALMAWETI AWPLAFLTLG 
VLAFFRDPVR VTPRDDRFVV SPADGLITLI QKVPPPRELC ADDGSGVRGM NDAPVTRVSI
FMSVFDVHIN RSPIAGTIRR VVYIPGKFLN ADLDKASEEN ERQHFLVERA DGVQIGFTQI
AGLIARRIVP FVKGGDIVAV GQRVGLIRFG SRVDVYLPAG TEPKVLMGQK VIAGETVLAE
IGEAPMIEGI GQ