| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1322 |
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| Symbol | rpsA |
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| ID | 3917771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 1365649 |
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| End bp | 1367349 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640444059 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_496600 |
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| Protein GI | 87199343 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.85252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGCA ATCCCTCGCG CGACGATTTC GCCGCGCTTC TTGACGAATC GCTTGGCGGC
GCCGCCAACG GTGGCTTCGA AGGCCGCGTC GTCAAGGGCA CCATCACCGC CATCGAAAAC
GACAAGGCCG TCATCGACGT GGGCCTGAAG AGCGAGGGCC GCGTTGCCCT GCGCGAATTC
GCCGCCCCCG GCCAGCCGCA CGGCCTCAAG GTCGGCGACG AAGTCGAAGT CTACGTCGAC
CGCGTCGAGA ACGCCGACGG CGAAGCCATG CTGTCGCGCG ACCGCGCTCG CCGCGAAGCC
GCGTGGGACA AGCTGGAAAG CGAATTTGGC GAAGGCAAGC GCGTTGAAGG CGTGATCTTC
GGCCGCGTGA AGGGTGGCTT CACCGTCGAC CTCGACGGCG CCGTGGCCTT CCTCCCCGGC
TCGCAGGTCG ACATCCGCCC GGTCCGCGAC GTGACCCCGC TGATGGACAT GCCGCAGCCG
TTCCAGATCC TCAAGATGGA CCGCCGCCGC GGCAACATCG TCGTCTCGCG CCGCGCGGTG
CTGGAAGAAA CCCGCGCCGA ACAGCGCTCG GGCCTGATCC AGAACCTCAA GGAAGGCCAG
ATCATCGACG GCGTCGTCAA GAACATCACC GACTACGGTG CGTTCGTCGA CCTCGGCGGC
ATCGACGGCC TGCTCCATGT CACCGACATG AGCTACAAGC GCGTCAACCA CCCGTCGGAA
GTGATCGCCA TCGGCGATAC CGTCCGCGTC CAGATCATCC GCATCAACCA GGACACGCAG
CGCATCAGCC TCGGCATGAA GCAGCTTGAA AGCGATCCGT GGGATGGCGT CGCCGCCAAG
TACCCGGTCG GCGCGAAGCT GCGTGGCACT GTCACCAACA TCACCGAATA CGGCGCGTTC
GTCGAGCTGG AAGCCGGCAT CGAAGGCCTC GTCCACGTTT CGGAAATGTC CTGGACCAAG
AAGAACGTCC ACCCCGGCAA GATCGTCTCG ACCTCGCAGG AAGTCGACGT CATGGTGCTG
GAAGTCGACA GCGACAAGCG CCGCATCAGC CTCGGCCTCA AGCAGGCCCA GCAGAACCCC
TGGGAAGCCT TTGCAGAAAA GCACCCGGTC GGTTCGACCG TGGAAGGCGA AGTCAAGAAC
GCGACCGAAT TCGGCCTGTT CATCGGCCTC GACGGCGACG TCGACGGCAT GGTCCACATG
TCGGACATCG CCTGGGGCAT CTCGGGCGAG GACGCGCTGG CGCTGCACCG CAAGGGCGAG
CAGGTCTCGG CCGTGGTTCT CGACGTCGAC GTCGAGAAGG AACGCATCAG CCTCGGCATG
AAGCAGCTTG AAAAGGGCGC TCCGGCGGCC GGCGGCGTTG CTTCCTCGGG CTCGCTGCGT
CGTGGCGAAG TCGTCACCGT CACCGTTCTC GAAGTCCGCG ATGGCGGCCT CGAAGTGCAG
GCTGGCGAAG ACGGCGCGAC CGGCTTCATC AAGCGCTCGG ACCTCGGCCG CGACCGCGAC
GAGCAGCGTC CGGACCGCTT CCAGGTCGGC CAGAAGATCG ACGCCATGGT CACCGGCTTC
GATCGTTCGA AGAAGCCGAA CTTCTCGGTC AAGGCGCGCC AGCTCGCAGA AGAGAAGGAA
GCCGTGGAAC AGTACGGCTC GTCGGATGCC GGCGCTTCGC TGGGCGACAT CCTCGGCGCC
GCGCTGAAGG CGAAGCAGTA A
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| Protein sequence | MASNPSRDDF AALLDESLGG AANGGFEGRV VKGTITAIEN DKAVIDVGLK SEGRVALREF
AAPGQPHGLK VGDEVEVYVD RVENADGEAM LSRDRARREA AWDKLESEFG EGKRVEGVIF
GRVKGGFTVD LDGAVAFLPG SQVDIRPVRD VTPLMDMPQP FQILKMDRRR GNIVVSRRAV
LEETRAEQRS GLIQNLKEGQ IIDGVVKNIT DYGAFVDLGG IDGLLHVTDM SYKRVNHPSE
VIAIGDTVRV QIIRINQDTQ RISLGMKQLE SDPWDGVAAK YPVGAKLRGT VTNITEYGAF
VELEAGIEGL VHVSEMSWTK KNVHPGKIVS TSQEVDVMVL EVDSDKRRIS LGLKQAQQNP
WEAFAEKHPV GSTVEGEVKN ATEFGLFIGL DGDVDGMVHM SDIAWGISGE DALALHRKGE
QVSAVVLDVD VEKERISLGM KQLEKGAPAA GGVASSGSLR RGEVVTVTVL EVRDGGLEVQ
AGEDGATGFI KRSDLGRDRD EQRPDRFQVG QKIDAMVTGF DRSKKPNFSV KARQLAEEKE
AVEQYGSSDA GASLGDILGA ALKAKQ
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